CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
plastid 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001176.1-P	Field mustard	golgi, plasma membrane, vacuole	99.21	99.21
CDX74116	Canola	plasma membrane	99.21	99.21
CDY18836	Canola	plasma membrane	92.32	92.5
CDY27726	Canola	golgi, plasma membrane, vacuole	90.16	90.87
CDY05216	Canola	plasma membrane	89.76	90.48
AT3G05960.1	Thale cress	plasma membrane	89.17	89.35
CDY52634	Canola	plasma membrane	80.12	81.24
CDX88227	Canola	plasma membrane	79.53	80.96
GSMUA_Achr9P11150_001	Banana	plasma membrane	65.55	65.42
GSMUA_Achr11P...	Banana	plasma membrane	64.96	64.96
TraesCS1D01G343200.1	Wheat	plasma membrane	61.81	61.45
TraesCS1A01G341100.1	Wheat	plasma membrane	61.81	61.45
TraesCS1B01G353800.1	Wheat	plasma membrane	61.42	61.06
Zm00001d019138_P001	Maize	plasma membrane	61.02	60.43
EER98187	Sorghum	plasma membrane	60.63	60.16
CDY68476	Canola	plasma membrane	12.6	58.18
CDY67102	Canola	cytosol, plasma membrane, vacuole	56.89	57.46
GSMUA_Achr11P...	Banana	plasma membrane	61.22	57.06
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	61.81	56.99
CDX80558	Canola	plasma membrane	56.5	56.61
CDY10269	Canola	plasma membrane	54.92	55.91
CDY06700	Canola	plasma membrane	54.72	55.71
CDY19773	Canola	plasma membrane	58.27	55.64
CDX86492	Canola	plasma membrane	54.53	55.62
CDX87052	Canola	peroxisome, plasma membrane, vacuole	58.07	55.45
CDY15608	Canola	plasma membrane	54.33	55.42
CDY62955	Canola	extracellular, plasma membrane	22.44	54.81
CDY29325	Canola	golgi, plasma membrane, vacuole	53.74	52.91
CDY53930	Canola	golgi, plasma membrane, vacuole	53.74	52.91
CDY42509	Canola	golgi, plasma membrane, vacuole	53.35	52.52
CDY22788	Canola	golgi, plasma membrane, vacuole	53.35	52.52
CDY66084	Canola	golgi, plasma membrane, vacuole	37.8	52.03
CDY33432	Canola	plasma membrane	52.17	51.86
CDY33434	Canola	plasma membrane	52.17	51.86
CDX90958	Canola	plasma membrane	51.97	51.46
CDY22024	Canola	plasma membrane	51.18	51.18
CDY07098	Canola	plasma membrane	51.18	51.18
CDY62951	Canola	plasma membrane	43.7	51.03
CDY33431	Canola	plasma membrane	42.91	50.82
CDX82272	Canola	plasma membrane	42.91	50.82
CDY25359	Canola	plasma membrane	42.72	50.58
CDY36072	Canola	plasma membrane	42.52	50.35
CDY38688	Canola	plasma membrane	42.72	50.35
CDX79066	Canola	plasma membrane	50.79	50.29
CDY62952	Canola	golgi, plasma membrane, vacuole	51.97	50.19
CDX82827	Canola	golgi, plasma membrane, vacuole	50.59	50.1
CDY33433	Canola	cytosol, peroxisome, plasma membrane	29.13	50.0
CDY24593	Canola	plasma membrane	42.72	49.32
CDY02218	Canola	plasma membrane	41.93	49.31
CDX97945	Canola	plasma membrane	50.2	48.85
CDY19352	Canola	plasma membrane	49.8	48.47
CDY34842	Canola	plasma membrane	49.61	48.37
CDY45759	Canola	plasma membrane	49.21	47.89
CDY26777	Canola	plasma membrane	42.91	47.39
CDY47467	Canola	plasma membrane	45.67	47.25
CDX87534	Canola	plasma membrane	44.49	46.99
CDX88350	Canola	plasma membrane	46.26	45.99
CDY66862	Canola	plasma membrane	45.28	45.45
CDY34655	Canola	plasma membrane	49.41	45.06
CDX91766	Canola	golgi, plasma membrane, vacuole	44.49	44.84
CDY23062	Canola	golgi, plasma membrane, vacuole	37.2	44.26
CDY02138	Canola	golgi, plasma membrane, vacuole	37.01	44.03
CDY62956	Canola	cytosol	3.15	39.02
CDX91815	Canola	plasma membrane	51.97	31.43

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:A0A078IJ92	UniProt:A0A078IJ92	EnsemblPlants:CDY49992	ProteinID:CDY49992
ProteinID:CDY49992.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00094193001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF77	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0004EECBCE	SEG:seg	:	:

Description

BnaC03g34490DBnaC03g34490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ92]

Coordinates

chrLK032873:-:57852..60689

Molecular Weight (calculated)

55713.0 Da

IEP (calculated)

8.201

GRAVY (calculated)

0.610

Length

508 amino acids

Sequence
(BLAST)

001: MAVVVSANGN GPAFEAKMTV YVFVCVLIAA VGGLIFGYDI GISGGVTAMD DFLKKFFPTV WERKQHAHEN NYCKYDNQHL QLFTSSLYLA ALVASFLASA
101: VCSKLGRKPT MQFASVFFLI GVGLAAGADN IVMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PAQLRGGLNI VFQLMVTIGI LIANLVNYFT ATVHPNGWRF
201: ALGGAAIPAV ILLLGSLIIC ETPTSLIERN KNEEGRETLR KIRGVEDIND EYESIVHACE IASQVKDPYR KLLKPASRPP LIIGMLLQLF QQFSGINAIM
301: FYAPVLFQTV GFGSNAALLS AVITGSINVL STFVGIYLVD RTGRRFLLLQ SSVHMLISQL IIGIILAKDL GITGTLGKAQ AMVVVVFVCA YVMGFAWSWG
401: PLGWLIPSET FPLETRSAGF AVAVSCNMLF TFVIAQAFLS MLCGMKSGIF FFFSAWIIVM GLFALFFIPE TKGVAIDDVR ERVWKPHWFW KRYMLAEDDH
501: QDVEKRTE

Best Arabidopsis Sequence Match ( AT3G05960.1 )
(BLAST)

001: MAVVVSNANA PAFEAKMTVY VFICVMIAAV GGLIFGYDIG ISGGVSAMDD FLKEFFPAVW ERKKHVHENN YCKYDNQFLQ LFTSSLYLAA LVASFVASAT
101: CSKLGRRPTM QFASIFFLIG VGLTAGAVNL VMLIIGRLFL GFGVGFGNQA VPLFLSEIAP AQLRGGLNIV FQLMVTIGIL IANIVNYFTA TVHPYGWRIA
201: LGGAGIPAVI LLFGSLLIIE TPTSLIERNK NEEGKEALRK IRGVDDINDE YESIVHACDI ASQVKDPYRK LLKPASRPPF IIGMLLQLFQ QFTGINAIMF
301: YAPVLFQTVG FGSDAALLSA VITGSINVLA TFVGIYLVDR TGRRFLLLQS SVHMLICQLI IGIILAKDLG VTGTLGRPQA LVVVIFVCVY VMGFAWSWGP
401: LGWLIPSETF PLETRSAGFA VAVSCNMFFT FVIAQAFLSM LCGMRSGIFF FFSGWIIVMG LFAFFFIPET KGIAIDDMRE SVWKPHWFWK RYMLPEDDHH
501: DIEKRNA

Arabidopsis Description

STP6Sugar transport protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFG0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.