CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34842	Canola	plasma membrane	92.1	98.46
CDY19352	Canola	plasma membrane	91.92	98.08
CDX97945	Canola	plasma membrane	91.74	97.89
AT1G11260.1	Thale cress	plasma membrane	90.66	96.74
VIT_00s0181g00010.t01	Wine grape	plasma membrane	77.2	82.85
KRH49937	Soybean	endoplasmic reticulum	75.58	81.27
KRH41938	Soybean	mitochondrion, nucleus	74.51	79.96
CDX82827	Canola	golgi, plasma membrane, vacuole	73.43	79.73
CDX79066	Canola	plasma membrane	73.25	79.53
PGSC0003DMT400057709	Potato	plasma membrane	72.89	77.63
Solyc02g079220.2.1	Tomato	nucleus	72.35	77.06
Solyc03g006650.1.1	Tomato	plasma membrane	70.92	76.25
PGSC0003DMT400012931	Potato	plasma membrane	71.63	76.14
CDY62955	Canola	extracellular, plasma membrane	23.7	63.46
CDY29325	Canola	golgi, plasma membrane, vacuole	56.19	60.66
CDY53930	Canola	golgi, plasma membrane, vacuole	56.19	60.66
CDY33433	Canola	cytosol, peroxisome, plasma membrane	32.14	60.47
CDY02218	Canola	plasma membrane	46.68	60.19
CDY66084	Canola	golgi, plasma membrane, vacuole	39.86	60.16
CDY33432	Canola	plasma membrane	55.12	60.08
CDY42509	Canola	golgi, plasma membrane, vacuole	55.66	60.08
CDY22788	Canola	golgi, plasma membrane, vacuole	55.66	60.08
CDY33434	Canola	plasma membrane	54.94	59.88
CDY36072	Canola	plasma membrane	45.96	59.67
CDX82272	Canola	plasma membrane	45.78	59.44
CDY62951	Canola	plasma membrane	46.14	59.08
CDY25359	Canola	plasma membrane	45.42	58.97
CDY33431	Canola	plasma membrane	45.42	58.97
CDY38688	Canola	plasma membrane	45.24	58.47
CDY45759	Canola	plasma membrane	54.76	58.43
CDY68476	Canola	plasma membrane	11.49	58.18
CDY62952	Canola	golgi, plasma membrane, vacuole	54.76	57.98
CDY24593	Canola	plasma membrane	45.42	57.5
CDY07098	Canola	plasma membrane	51.89	56.89
CDY22024	Canola	plasma membrane	51.53	56.5
CDX90958	Canola	plasma membrane	51.53	55.95
CDX87052	Canola	peroxisome, plasma membrane, vacuole	53.32	55.83
CDY19773	Canola	plasma membrane	53.32	55.83
CDY67102	Canola	cytosol, plasma membrane, vacuole	50.27	55.67
CDX80558	Canola	plasma membrane	49.91	54.83
CDY62956	Canola	cytosol	3.95	53.66
CDX88227	Canola	plasma membrane	46.5	51.9
CDY23062	Canola	golgi, plasma membrane, vacuole	39.68	51.76
CDY52634	Canola	plasma membrane	46.5	51.7
CDY47467	Canola	plasma membrane	45.42	51.53
CDY02138	Canola	golgi, plasma membrane, vacuole	39.5	51.52
CDY26777	Canola	plasma membrane	42.37	51.3
CDY18836	Canola	plasma membrane	46.32	50.89
CDY27726	Canola	golgi, plasma membrane, vacuole	45.96	50.79
CDY05216	Canola	plasma membrane	45.96	50.79
CDY66862	Canola	plasma membrane	45.96	50.59
CDX91766	Canola	golgi, plasma membrane, vacuole	45.6	50.4
CDX87534	Canola	plasma membrane	43.45	50.31
CDY49992	Canola	golgi, plasma membrane, vacuole	45.06	49.41
CDX74116	Canola	plasma membrane	45.06	49.41
CDX88350	Canola	plasma membrane	45.24	49.32
CDY06700	Canola	plasma membrane	44.17	49.3
CDX86492	Canola	plasma membrane	43.99	49.2
CDY10269	Canola	plasma membrane	43.99	49.1
CDY15608	Canola	plasma membrane	43.63	48.8
CDX91815	Canola	plasma membrane	50.63	33.57

Protein Annotations

MapMan:24.2.2.1.6	GO:A0A078H809	UniProt:A0A078H809	EnsemblPlants:CDY34655	ProteinID:CDY34655	ProteinID:CDY34655.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00057113001	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI0004EF2C98	SEG:seg	:	:	:

Description

BnaC08g42140DBnaC08g42140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H809]

Coordinates

chrLK032338:-:304163..307293

Molecular Weight (calculated)

61749.4 Da

IEP (calculated)

9.544

GRAVY (calculated)

0.503

Length

557 amino acids

Sequence
(BLAST)

001: MPAGGFVAGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLRRFFPS VYRKQQEDAT TNQYCQYDSP KLTLFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQVLEKIKLD KLSTWYLIKF SQVDIIIFLL LLLSVYNNSV PLYLSEMAPY
201: KYRGALNIGF QLSITIGILV AEVLNYFFAK IKGGWGWRLS LGGAVVPALI ITLGSLVLPD TPNSMIERGQ HEKAKTKLRR IRGVDDVSQE FDDLVAASKE
301: SQSIEHPWTN LLRRKYRPHL TMAIMIPFFQ QLTGINVIMF YAPVLFNTIG FTTDASLMSA VVTGSVNVAA TLVSIYGVDK WGRRFLFLEG GTQMLICQAV
401: VAACIGAKFG VDGTPGELPK WYAIVVVTFI CIYVAGFAWS WGPLGWLVPS EIFPLEIRSA AQSITVSVNM IFTFIIAQIF LTMLCHLKFG LFLVFAFFVV
501: VMSIFVYIFL PETKGIPIEE MGQVWRSHWY WSRFVEDGEY GNGLQMGKSS NQGTKHV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.