Factsheet for PGSC0003DMT400012931

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006650.1.1	Tomato	plasma membrane	94.08	95.17
PGSC0003DMT400057709	Potato	plasma membrane	86.07	86.23
VIT_00s0181g00010.t01	Wine grape	plasma membrane	79.2	79.96
KRH49937	Soybean	endoplasmic reticulum	78.05	78.96
KRH41938	Soybean	mitochondrion, nucleus	77.67	78.42
AT4G21480.1	Thale cress	plasma membrane	74.62	77.89
AT1G11260.1	Thale cress	plasma membrane	77.1	77.39
Bra031762.1-P	Field mustard	plasma membrane	76.91	77.35
CDX97945	Canola	plasma membrane	76.91	77.2
Bra019870.1-P	Field mustard	plasma membrane	76.91	77.2
CDY34842	Canola	plasma membrane	76.72	77.16
CDX79066	Canola	plasma membrane	75.38	77.0
Bra013529.1-P	Field mustard	plasma membrane	75.38	77.0
CDY19352	Canola	plasma membrane	76.53	76.82
CDX82827	Canola	golgi, plasma membrane, vacuole	75.0	76.61
CDY34655	Canola	plasma membrane	76.14	71.63
PGSC0003DMT400094737	Potato	golgi, plasma membrane, vacuole	66.22	65.72
PGSC0003DMT400064529	Potato	plasma membrane	62.02	63.48
PGSC0003DMT400064478	Potato	plasma membrane	61.83	63.28
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	58.02	60.08
PGSC0003DMT400048537	Potato	plasma membrane	55.73	57.37
PGSC0003DMT400081426	Potato	mitochondrion	55.73	55.83
PGSC0003DMT400048280	Potato	plasma membrane	54.58	55.75
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	54.01	55.6
PGSC0003DMT400000990	Potato	plasma membrane	48.47	54.98
PGSC0003DMT400070558	Potato	plasma membrane	52.1	52.91
PGSC0003DMT400030841	Potato	plasma membrane	47.9	51.33
PGSC0003DMT400034820	Potato	plasma membrane	47.52	51.13
PGSC0003DMT400034821	Potato	plasma membrane	45.23	50.53
PGSC0003DMT400016373	Potato	plasma membrane	48.85	49.81

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102582032	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M1A215	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG400005039	PGSC:PGSC0003DMG400005039	EnsemblPlants:PGSC0003DMT400012931	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0002962B3F	RefSeq:XP_006343267.1	SEG:seg	:

Description

Monosaccharid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400005039]

Coordinates

chr3:+:2205251..2208705

Molecular Weight (calculated)

57615.1 Da

IEP (calculated)

8.657

GRAVY (calculated)

0.546

Length

524 amino acids

Sequence
(BLAST)

001: MAGGGGGVSH GNNGKEYPGN LTLYVTITCI VAAMGGLIFG YDIGISGGVT SMDSFLSKFF HSVYTKQKAD TSTNQYCKFD SQTLTMFTSS LYLAALFSSI
101: VASTVTRKLG RKLSMLFGGV LFCVGALING LARDVAMLIV GRILLGFGIG FANQSVPLYL SEMAPYKYRG ALNIGFQLSI TIGILVANVL NFFFAKFDWG
201: WRLSLGGAMV PGLIITVGSL LLPETPNSMI ERGNNEEAKT KLKRIRGVDD VDEEFNDLVV ASEASRKVEH PWRNLLQRKY RPHLTMAIAI PFFQQLTGIN
301: VIMFYAPVLF KTIGFGGDAS LMSAVITGIV NVGATIVSIY YVDKLGRRFL FLEGGIQMLI CQIAVAICIG TKFGTDGYAG ELPKWYATLV VIFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSINV SVNMIFTFIV AQVFLTLLCH LKFGLFIFFA FFVCVMTVFI YFFLPETKNV PIEEMVVVWK QHWFWSRFMT
501: EVDYPGAAAA NVEMAKGDNG SKLV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.