Factsheet for PGSC0003DMT400064478

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064529	Potato	plasma membrane	99.22	99.22
Solyc03g078600.1.1	Tomato	plasma membrane	76.37	89.47
VIT_14s0083g00020.t01	Wine grape	plasma membrane	59.77	63.35
PGSC0003DMT400012931	Potato	plasma membrane	63.28	61.83
PGSC0003DMT400057709	Potato	plasma membrane	62.11	60.8
VIT_14s0083g00030.t01	Wine grape	plasma membrane	62.3	60.76
PGSC0003DMT400094737	Potato	golgi, plasma membrane, vacuole	61.91	60.04
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	56.84	57.51
VIT_14s0083g00040.t01	Wine grape	plasma membrane	59.77	57.2
PGSC0003DMT400048537	Potato	plasma membrane	56.84	57.17
PGSC0003DMT400081426	Potato	mitochondrion	55.27	54.11
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	53.52	53.83
PGSC0003DMT400034820	Potato	plasma membrane	50.0	52.57
PGSC0003DMT400048280	Potato	plasma membrane	52.34	52.24
PGSC0003DMT400000990	Potato	plasma membrane	46.09	51.08
PGSC0003DMT400030841	Potato	plasma membrane	48.63	50.92
PGSC0003DMT400070558	Potato	plasma membrane	51.17	50.78
PGSC0003DMT400034821	Potato	plasma membrane	46.48	50.75
PGSC0003DMT400016373	Potato	plasma membrane	45.51	45.33

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102579032	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M1CCF4	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG400025054	PGSC:PGSC0003DMG400025054	EnsemblPlants:PGSC0003DMT400064478	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI000295EFB0	RefSeq:XP_006359025.1	SEG:seg	:	:

Description

Hexose transporter 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400025054]

Coordinates

chr4:-:61467750..61469288

Molecular Weight (calculated)

56208.6 Da

IEP (calculated)

9.065

GRAVY (calculated)

0.642

Length

512 amino acids

Sequence
(BLAST)

001: MAGGNFMGAD EGGCEYPGKL TRYVALTCIM AAMGGLIFGY DIGISGGVTS MDPFLKLFFP SVYRKEALDT STNQYCKFDS QLLTLFTSSL YVAALIASFV
101: ASFVSKKHGR KVTMFLGGLF FLFGAVLNAA AVHISMLILG RILLGVGVGF ANQSVPIYLS EIAPYKYRGT FNVLFQLAIT VGILIANIVN FLTNKISAGW
201: GWRVSLGGAA VPALVILISS FFLDDTPSSL IQRGKSEEAE QLLKKIRGVD NVDAELKDLV EASEASNKVQ HPWKVLLRVR KYKPQLILST LIPTFQQLTG
301: INVVMFYAPV LFQTLGFKAN ASLMSAVITG AVNVGATFIS VYCTDRYGRK VLLLTGGVLM CVFQALVAGL IGWKFGTTGV VATVLPQSYA ILVVLCICVF
401: VAAFAFSWGP LGWLIPSEIS PLEVRSAAQS VTVSMNMLFT FAVAQVFLKV LCWMKFGLFI FFAAFVFIMT LFVYFYVPET KNIPIEEMSR VWTEHWYWKN
501: YMDEQSPAKE VV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.