Factsheet for VIT_14s0083g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00030.t01	Wine grape	plasma membrane	97.31	89.52
VIT_14s0083g00040.t01	Wine grape	plasma membrane	76.81	69.35
VIT_00s0181g00010.t01	Wine grape	plasma membrane	69.36	64.55
Solyc03g078600.1.1	Tomato	plasma membrane	57.14	63.16
PGSC0003DMT400064478	Potato	plasma membrane	63.35	59.77
PGSC0003DMT400064529	Potato	plasma membrane	63.15	59.57
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	55.69	52.95
VIT_11s0149g00050.t01	Wine grape	plasma membrane	56.31	51.71
VIT_18s0001g05570.t01	Wine grape	plasma membrane	53.0	51.2
VIT_05s0020g03140.t01	Wine grape	plasma membrane	56.52	50.93
VIT_11s0016g03400.t01	Wine grape	plasma membrane	53.21	50.2
VIT_05s0020g03100.t01	Wine grape	plasma membrane	49.07	49.89
VIT_13s0019g01500.t01	Wine grape	plasma membrane	46.58	47.77
VIT_13s0019g01480.t01	Wine grape	plasma membrane	48.45	47.18
VIT_09s0018g02060.t01	Wine grape	plasma membrane	49.07	46.84

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100244654	wikigene:100244654	EntrezGene:100854876	wikigene:100854876	MapMan:24.2.2.1.6
EMBL:AM457855	ProteinID:CAN81097	ProteinID:CAN81097.1	ProteinID:CCB44034	ProteinID:CCB44034.1	ProteinID:CCB44035
ProteinID:CCB44035.1	UniProt:F6GVQ0	EMBL:FN594955	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351
GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600
GO:GO:1904659	EntrezGene:HT9	wikigene:HT9	InterPro:IPR020846	EntrezGene:LOC100854876	wikigene:LOC100854876
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF360	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI000210866A	ArrayExpress:VIT_14s0083g00020	EnsemblPlantsGene:VIT_14s0083g00020	EnsemblPlants:VIT_14s0083g00020.t01
RefSeq:XP_002279895	RefSeq:XP_002279895.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:+:21924594..21926526

Molecular Weight (calculated)

53915.8 Da

IEP (calculated)

9.180

GRAVY (calculated)

0.576

Length

483 amino acids

Sequence
(BLAST)

001: MGGLIFGYDI GISGGVTSMP TFLEKFFPSV YKKEELDKST NQYCKFDSQI LTLFTSSLYL AALVSSLVAS YATRRFGRRL SMLVGGLIFM VGAILNAFAV
101: NILMLIFGRI LLGFGVGFAT QAVPIYVSEM APYKHRGALN NVFQLSITIG ILVANVVNYF TAKIEGGWGW RVSLGGAAIP AVFISVVAWI LPNTPNSMIE
201: KGELQQAREM LCRIRGVSDR EIEAEYIDLV AASEASRRVQ HPWRNLRLRE YRPQLVMSIL IPALQQLTGI NVVMFYAPVL FQSLGFGNNA SLFSAVITGL
301: VNMLATFVAV FGTDKWGRRK LFIEGGIQML IFQVAVAVLI ALKFGVSGNV TELPEWYSII VVMCICIYVS AFAWSWGPLG WLVPSEIFPL EIRSAAQSIT
401: VSVNMFFTFG VAEVFLSMLC GLKYGLFIFF SVFVAIMTVF IYVFLPETKG IPIEEMRVVW KRHWYWKRFM PDHDDQQVNG NSV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.