Factsheet for VIT_14s0083g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00020.t01	Wine grape	plasma membrane	89.52	97.31
VIT_14s0083g00040.t01	Wine grape	plasma membrane	74.1	72.71
VIT_00s0181g00010.t01	Wine grape	plasma membrane	66.1	66.86
Solyc03g078600.1.1	Tomato	plasma membrane	52.95	63.62
PGSC0003DMT400064478	Potato	plasma membrane	60.76	62.3
PGSC0003DMT400064529	Potato	plasma membrane	60.76	62.3
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	52.95	54.72
VIT_11s0149g00050.t01	Wine grape	plasma membrane	53.71	53.61
VIT_18s0001g05570.t01	Wine grape	plasma membrane	49.9	52.4
VIT_05s0020g03140.t01	Wine grape	plasma membrane	52.76	51.68
VIT_11s0016g03400.t01	Wine grape	plasma membrane	50.1	51.37
VIT_05s0020g03100.t01	Wine grape	plasma membrane	44.76	49.47
VIT_13s0019g01480.t01	Wine grape	plasma membrane	44.95	47.58
VIT_09s0018g02060.t01	Wine grape	plasma membrane	45.71	47.43
VIT_13s0019g01500.t01	Wine grape	plasma membrane	42.29	47.13

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100249799	wikigene:100249799	EntrezGene:100855077	wikigene:100855077	MapMan:24.2.2.1.6
ProteinID:ADP37131	ProteinID:ADP37131.1	ProteinID:ADP37132	ProteinID:ADP37132.1	EMBL:AM457855	ProteinID:CAN81097
ProteinID:CAN81097.1	ProteinID:CCB44036	ProteinID:CCB44036.1	UniProt:F6GVQ1	EMBL:FN594955	GO:GO:0003674
GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323
GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	EMBL:HQ323266	EMBL:HQ323267	EntrezGene:HT10
wikigene:HT10	InterPro:IPR020846	EntrezGene:LOC100855077	wikigene:LOC100855077	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF360	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI000210866B	ArrayExpress:VIT_14s0083g00030	EnsemblPlantsGene:VIT_14s0083g00030	EnsemblPlants:VIT_14s0083g00030.t01	RefSeq:XP_002279883	RefSeq:XP_002279883.1
RefSeq:XP_003633717	RefSeq:XP_003633717.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:+:21931921..21935710

Molecular Weight (calculated)

58171.0 Da

IEP (calculated)

9.281

GRAVY (calculated)

0.522

Length

525 amino acids

Sequence
(BLAST)

001: MAPLVGIKAG GFMGPSGGDH VEYPGKLTWS VLISCVLGAM GGLIFGYDIG ISGGVTSMPT FLEKFFPSVY KKEELDKSTN QYCKFDSQIL TLFTSSLYLA
101: ALVSSLVASY ATRRFGRRVS MLVGGLIFMA GAILNAFAVN ILMLIFGRIL LGFGVGFATQ SVPIYVSEMA PYKHRGALNN VFQLSITIGI LVANVVNYFT
201: AKIEGGWGWR VSLGGAAIPA IFISAVAWIL PNTPNSMIEK GELQQAREML CRIRGVSDRE IEAEYIDLVA ASEASKRVQH PWRNLRLSEY RPQLVMSILI
301: PALQQLTGIN VVMFYAPVLF QSLGFGNNAS LFSAVITGLV NMLATFVAVF GTDKWGRRKL FIEGGIQMLI FQVAVAVLIA LKFGVSGNVT ELPEWYSIIV
401: VMCICIYVSA FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMFFTFGV AEVFLSMLCG LKYGLFIFFS VFVAIMTVFI YVFLPETKGI PIEEMRVVWK
501: RHWYWKRFMP DYDDQQGKQN KKEKP

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.