Factsheet for VIT_11s0016g03400.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77210.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g018230.2.1	Tomato	plasma membrane	66.02	82.44
PGSC0003DMT400070558	Potato	plasma membrane	80.27	79.65
PGSC0003DMT400000990	Potato	plasma membrane	71.29	79.0
Solyc12g008320.1.1	Tomato	plasma membrane	79.3	78.83
AT1G77210.1	Thale cress	plasma membrane	74.61	75.79
KRH76334	Soybean	plasma membrane	75.39	75.69
KRH39352	Soybean	plasma membrane	75.2	75.2
CDX87534	Canola	plasma membrane	69.34	73.8
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	53.71	72.56
CDX88350	Canola	plasma membrane	71.68	71.82
GSMUA_Achr6P22680_001	Banana	plasma membrane	71.88	70.63
KRH60234	Soybean	mitochondrion	70.12	70.25
Zm00001d005594_P001	Maize	plasma membrane	70.9	70.08
KRH41519	Soybean	plasma membrane	69.53	69.67
Zm00001d020071_P001	Maize	plasma membrane	70.12	68.77
TraesCS5B01G180800.1	Wheat	plasma membrane	69.34	67.23
TraesCS5D01G187100.1	Wheat	plasma membrane	69.34	67.11
TraesCS5A01G182600.1	Wheat	plasma membrane	69.14	66.92
HORVU5Hr1G055850.2	Barley	plasma membrane	68.55	66.23
VIT_11s0149g00050.t01	Wine grape	plasma membrane	58.79	57.22
VIT_05s0020g03140.t01	Wine grape	plasma membrane	55.86	53.36
VIT_14s0083g00020.t01	Wine grape	plasma membrane	50.2	53.21
VIT_00s0181g00010.t01	Wine grape	plasma membrane	51.95	51.25
VIT_05s0020g03100.t01	Wine grape	plasma membrane	47.46	51.16
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	49.8	50.2
VIT_14s0083g00030.t01	Wine grape	plasma membrane	51.37	50.1
VIT_13s0019g01480.t01	Wine grape	plasma membrane	47.66	49.19
VIT_13s0019g01500.t01	Wine grape	plasma membrane	45.12	49.04
VIT_09s0018g02060.t01	Wine grape	plasma membrane	48.05	48.62
VIT_18s0001g05570.t01	Wine grape	plasma membrane	47.27	48.4
VIT_14s0083g00040.t01	Wine grape	plasma membrane	49.41	47.29
GSMUA_Achr8P27410_001	Banana	golgi, peroxisome, plasma membrane	56.45	41.58

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100262713	wikigene:100262713	MapMan:24.2.2.1.6	ProteinID:ADP37135	ProteinID:ADP37135.1
EMBL:AM458782	ProteinID:CAN76865	ProteinID:CAN76865.1	ProteinID:CBI28023	ProteinID:CBI28023.3	UniProt:D7TBI8
EMBL:FN595756	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	EMBL:HQ323270
InterPro:IPR020846	EntrezGene:LOC100262713	wikigene:LOC100262713	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf
PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF14	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGR:TC56617	TIGR:TC68459
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00015C9110	ArrayExpress:VIT_11s0016g03400	EnsemblPlantsGene:VIT_11s0016g03400	EnsemblPlants:VIT_11s0016g03400.t01
unigene:Vvi.15807	RefSeq:XP_002283960	RefSeq:XP_002283960.1	SEG:seg	:	:

Description

Putative hexose transporter [Source:UniProtKB/TrEMBL;Acc:D7TBI8]

Coordinates

chr11:-:2760677..2763264

Molecular Weight (calculated)

56309.4 Da

IEP (calculated)

9.324

GRAVY (calculated)

0.424

Length

512 amino acids

Sequence
(BLAST)

001: MAGGAFEDTE AAKRAHLYEY KITGYFIFSC IVAASGGALF GYDLGVSGGV TSMDDFLKRF FPKVYRRKQE HLKETDYCKY ESQILTLFTS SLYFAGLVST
101: FAASHVTRKK GRKASILVGS ISFFLGAVLN AAAVNIAMLI IGRILLGVGI GFGNQAVPLY LSEMSPAKIR GAVNQLFQLS TCLGILVANF INYETDKLHP
201: WGWRLSLGLA TVPATVMFLG GLALPETPNS LVEQGKFEEA RKVLEKVRGT SKIEAEFADL VDASKAAQAI KHPFRNLLKR RNRPQLIIGA LGIPAFQQLT
301: GMNSILFYAP VIFQSLGFGS NASLYSSLIT SGALVLASLI SMAFVDRWGR RKFFLEAGCE MICYMVAVAI TLALEFGQGK TLPKGTSYFL VIIISLFVLA
401: YGRSWGPLGW LVPSELFPLE TRSAGQSMVV CVNLFFTALI AQCFLVSLCH LRYGIFLVFA GLIIIMSCFI YFLLPETKQV PIEEVCYLWS KHPIWKKIVG
501: DEPRTEGKSA EN

Best Arabidopsis Sequence Match ( AT1G77210.1 )
(BLAST)

001: MAGGALTDEG GLKRAHLYEH RITSYFIFAC IVGSMGGSLF GYDLGVSGGV TSMDDFLKEF FPGIYKRKQM HLNETDYCKY DNQILTLFTS SLYFAGLIST
101: FGASYVTRIY GRRGSILVGS VSFFLGGVIN AAAKNILMLI LGRIFLGIGI GFGNQAVPLY LSEMAPAKIR GTVNQLFQLT TCIGILVANL INYKTEQIHP
201: WGWRLSLGLA TVPAILMFLG GLVLPETPNS LVEQGKLEKA KAVLIKVRGT NNIEAEFQDL VEASDAARAV KNPFRNLLAR RNRPQLVIGA IGLPAFQQLT
301: GMNSILFYAP VMFQSLGFGG SASLISSTIT NAALVVAAIM SMYSADKFGR RFLLLEASVE MFCYMVVVGV TLALKFGEGK ELPKSLGLIL VVLICLFVLA
401: YGRSWGPMGW LVPSELFPLE TRSAGQSVVV CVNLFFTALI AQCFLVSLCH LKYGIFLLFA GLILGMGSFV YFLLPETKQV PIEEVYLLWR QHWLWKKYVE
501: DVDE

Arabidopsis Description

STP14Sugar transport protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.