Factsheet for VIT_13s0019g01500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g01480.t01	Wine grape	plasma membrane	96.6	91.73
VIT_09s0018g02060.t01	Wine grape	plasma membrane	98.51	91.7
VIT_05s0020g03100.t01	Wine grape	plasma membrane	76.86	76.21
Solyc03g005140.1.1	Tomato	plasma membrane	68.15	65.91
GSMUA_Achr9P11150_001	Banana	plasma membrane	71.13	65.82
PGSC0003DMT400034820	Potato	plasma membrane	67.73	65.5
PGSC0003DMT400030841	Potato	plasma membrane	67.94	65.44
GSMUA_Achr11P...	Banana	plasma membrane	70.49	65.35
Solyc06g054270.2.1	Tomato	plasma membrane	67.3	64.83
Solyc01g010530.1.1	Tomato	plasma membrane	66.45	64.01
PGSC0003DMT400034821	Potato	plasma membrane	60.3	60.55
Zm00001d019138_P001	Maize	plasma membrane	65.39	60.04
Solyc03g005150.2.1	Tomato	plasma membrane	62.0	59.96
EER98187	Sorghum	plasma membrane	64.97	59.77
TraesCS1D01G343200.1	Wheat	plasma membrane	64.12	59.1
GSMUA_Achr11P...	Banana	plasma membrane	67.94	58.72
TraesCS1A01G341100.1	Wheat	plasma membrane	63.69	58.71
TraesCS1B01G353800.1	Wheat	plasma membrane	63.48	58.51
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	63.48	54.27
VIT_05s0020g03140.t01	Wine grape	plasma membrane	59.87	52.61
VIT_14s0083g00020.t01	Wine grape	plasma membrane	47.77	46.58
VIT_11s0149g00050.t01	Wine grape	plasma membrane	51.59	46.2
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	49.47	45.87
VIT_00s0181g00010.t01	Wine grape	plasma membrane	50.11	45.47
VIT_11s0016g03400.t01	Wine grape	plasma membrane	49.04	45.12
VIT_14s0083g00040.t01	Wine grape	plasma membrane	48.83	42.99
VIT_18s0001g05570.t01	Wine grape	plasma membrane	45.01	42.4
VIT_14s0083g00030.t01	Wine grape	plasma membrane	47.13	42.29

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	ProteinID:ADP37143	ProteinID:ADP37143.1	ProteinID:ADP37144	ProteinID:ADP37144.1
ProteinID:ADP37145	ProteinID:ADP37145.1	ProteinID:CCB44579	ProteinID:CCB44579.1	UniProt:F6GX93	EMBL:FN594963
GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428
GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	EMBL:HQ323278	EMBL:HQ323279
EMBL:HQ323280	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF77
SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0002108376
ArrayExpress:VIT_13s0019g01500	EnsemblPlantsGene:VIT_13s0019g01500	EnsemblPlants:VIT_13s0019g01500.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr13_random:+:3049820..3051601

Molecular Weight (calculated)

52124.9 Da

IEP (calculated)

9.198

GRAVY (calculated)

0.622

Length

471 amino acids

Sequence
(BLAST)

001: MGVAGGVTAM DDFLIKFFPA VYQRKLRAKE DNYCKYDNQY LQLFTSSLYL AALVSSFAAS KMCSKLGRKP TIFVASAFFL CGSLLSAAAQ RIWMIILARV
101: LLGVGVGFGN EAVPLFLSEI APVQHRGAVN ILFQLFITIG ILFANLVNYG ASKIHPWGWR LSLGLASLPA AFLFVGSVVI IETPASLVER NQESQGLSTL
201: KKIRGVEDVD AEFEQIKMAC EAAREVKDPF KTLMKRSSMP PLIIGVMMQV FQQFTGINAI MFYAPVLFQT VGFKNDASLL SSVITGLVNV FSTLVSIYGV
301: DRVGRRKLLL QACVQMFISQ TAIGAILLVH LKGSNSLDEG LAGLVVVLVC LFVMSFAWSW GPLGWLIPSE TFPLEIRTSG FACAVSSNML FTFIIAQAFL
401: SMMCHMRAFI FFFFAAWIVV MGLFVLFLLP ETKNVPIDAM VERVWKQHPV WKRFMDDYDG KEGVKNVGMI I

Best Arabidopsis Sequence Match ( AT1G07340.1 )
(BLAST)

001: MAVGSMNVEE GTKAFPAKLT GQVFLCCVIA AVGGLMFGYD IGISGGVTSM DTFLLDFFPH VYEKKHRVHE NNYCKFDDQL LQLFTSSLYL AGIFASFISS
101: YVSRAFGRKP TIMLASIFFL VGAILNLSAQ ELGMLIGGRI LLGFGIGFGN QTVPLFISEI APARYRGGLN VMFQFLITIG ILAASYVNYL TSTLKNGWRY
201: SLGGAAVPAL ILLIGSFFIH ETPASLIERG KDEKGKQVLR KIRGIEDIEL EFNEIKYATE VATKVKSPFK ELFTKSENRP PLVCGTLLQF FQQFTGINVV
301: MFYAPVLFQT MGSGDNASLI STVVTNGVNA IATVISLLVV DFAGRRCLLM EGALQMTATQ MTIGGILLAH LKLVGPITGH AVPLIVLILI CVYVSGFAWS
401: WGPLGWLVPS EIYPLEVRNA GYFCAVAMNM VCTFIIGQFF LSALCRFRSL LFFFFGIMNI IMGLFVVFFL PETKGVPIEE MAEKRWKTHP RWKKYFKD

Arabidopsis Description

STP2STP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W5X1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.