Factsheet for PGSC0003DMT400034821

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g005150.2.1	Tomato	plasma membrane	92.54	89.12
PGSC0003DMT400034820	Potato	plasma membrane	78.25	75.36
PGSC0003DMT400030841	Potato	plasma membrane	76.12	73.01
VIT_13s0019g01480.t01	Wine grape	plasma membrane	65.67	62.1
VIT_09s0018g02060.t01	Wine grape	plasma membrane	65.88	61.07
VIT_05s0020g03100.t01	Wine grape	plasma membrane	61.62	60.84
VIT_13s0019g01500.t01	Wine grape	plasma membrane	60.55	60.3
GSMUA_Achr9P11150_001	Banana	plasma membrane	63.11	58.15
GSMUA_Achr11P...	Banana	plasma membrane	62.9	58.07
TraesCS1D01G343200.1	Wheat	plasma membrane	59.91	54.99
TraesCS1A01G341100.1	Wheat	plasma membrane	59.91	54.99
EER98187	Sorghum	plasma membrane	59.49	54.49
TraesCS1B01G353800.1	Wheat	plasma membrane	59.28	54.4
Zm00001d019138_P001	Maize	plasma membrane	59.06	54.0
GSMUA_Achr11P...	Banana	plasma membrane	60.77	52.29
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	59.28	50.45
PGSC0003DMT400081426	Potato	mitochondrion	55.65	49.9
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	50.96	47.23
PGSC0003DMT400064529	Potato	plasma membrane	50.96	46.68
PGSC0003DMT400064478	Potato	plasma membrane	50.75	46.48
PGSC0003DMT400012931	Potato	plasma membrane	50.53	45.23
PGSC0003DMT400057709	Potato	plasma membrane	49.89	44.74
PGSC0003DMT400048280	Potato	plasma membrane	48.61	44.44
PGSC0003DMT400000990	Potato	plasma membrane	43.28	43.94
PGSC0003DMT400070558	Potato	plasma membrane	47.33	43.02
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	46.06	42.44
PGSC0003DMT400094737	Potato	golgi, plasma membrane, vacuole	47.76	42.42
PGSC0003DMT400048537	Potato	plasma membrane	45.84	42.24
PGSC0003DMT400016373	Potato	plasma membrane	43.92	40.08

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:M1B1C1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	EnsemblPlantsGene:PGSC0003DMG400013385
PGSC:PGSC0003DMG400013385	EnsemblPlants:PGSC0003DMT400034821	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF77	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI0002967E32	SEG:seg	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400013385]

Coordinates

chr3:+:269035..271213

Molecular Weight (calculated)

51366.1 Da

IEP (calculated)

9.560

GRAVY (calculated)

0.701

Length

469 amino acids

Sequence
(BLAST)

001: MTVIEGHNSK ITVYVVSCWI LAAFGGLMFG YDIGISGGVS AMDDFLILFF RNVYERKKTA KENNYCKYDD QFLQLFTSSL YLSALVASFF ASKAATKLGR
101: KITMMMASLI FIAGAVSSAA AQNKKILILG RILFGIGIGF GNETVPLFLT EVAPIQHRGA VNILFQLFIT IGILIANLVN FVTVNIHPNG WRISLGSAVV
201: PAAILFIGTF VISDTPMSLV ARGKPEKGKT ALKKIRGVTD VDVEYEEIVA SCEQAKQVKH AFRNLTQPPS IPPLVIAIML QIFQQLTGIN AIMFYAPVLF
301: QTMGFKGSGP LISAVVTGLV NVLSTCVAII AVDKMAIGFI LLKNLSETGG LDKTMAVIVV LLVCTYVMAF AWSWGPLGWL IPSETFPLET RTAGFAFAVS
401: TNMLFTAIIA QAFLTTLCFM QAYTFFFFSA WIFVMGLCAI FFLPETKGIP IDAMVERAWK KHPVWKKLF

Best Arabidopsis Sequence Match ( AT5G26250.1 )
(BLAST)

001: MAVVISSNGN SKSFDAKMTV YVFICVIIAA VGGLIFGYDI GISGGVTAMD DFLKEFFPSV YERKKHAHEN NYCKYDNQFL QLFTSSLYLA ALVASFFASA
101: TCSKLGRRPT MQLASIFFLI GVGLAAGAVN IYMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PARLRGGLNI VFQLMVTIGI LIANIVNYFT SSIHPYGWRI
201: ALGGAGIPAL ILLFGSLLIC ETPTSLIERN KTKEGKETLK KIRGVEDVDE EYESIVHACD IARQVKDPYT KLMKPASRPP FVIGMLLQFF QQFTGINAIM
301: FYAPVLFQTV GFGNDAALLS AVVTGTINVL STFVGIFLVD KTGRRFLLLQ SSVHMLICQL VIGIILAKDL DVTGTLARPQ ALVVVIFVCV YVMGFAWSWG
401: PLGWLIPSET FPLETRTEGF ALAVSCNMFF TFVIAQAFLS MLCAMKSGIF FFFSGWIVVM GLFALFFVPE TKGVSIDDMR DSVWKLHWYW KRFMLEEDEH
501: DVEKRTD

Arabidopsis Description

STP8Sugar transport protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SBA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.