Factsheet for PGSC0003DMT400070558

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400015077
PGSC0003DMT400050482

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77210.1	PGSC0003DMT400015077	AT5G22290.1	21798944
AT1G77210.1	PGSC0003DMT400050482	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g018230.2.1	Tomato	plasma membrane	78.68	99.02
PGSC0003DMT400000990	Potato	plasma membrane	75.58	84.42
VIT_11s0016g03400.t01	Wine grape	plasma membrane	79.65	80.27
KRH39352	Soybean	plasma membrane	77.33	77.93
KRH76334	Soybean	plasma membrane	76.74	77.65
AT1G77210.1	Thale cress	plasma membrane	74.61	76.39
CDX87534	Canola	plasma membrane	69.96	75.05
KRH60234	Soybean	mitochondrion	72.67	73.39
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	53.88	73.35
GSMUA_Achr6P22680_001	Banana	plasma membrane	73.64	72.94
KRH41519	Soybean	plasma membrane	71.9	72.6
CDX88350	Canola	plasma membrane	71.71	72.41
Zm00001d005594_P001	Maize	plasma membrane	70.93	70.66
TraesCS5B01G180800.1	Wheat	plasma membrane	71.12	69.51
TraesCS5D01G187100.1	Wheat	plasma membrane	71.12	69.38
Zm00001d020071_P001	Maize	plasma membrane	70.16	69.35
TraesCS5A01G182600.1	Wheat	plasma membrane	70.93	69.19
HORVU5Hr1G055850.2	Barley	plasma membrane	70.54	68.68
PGSC0003DMT400048280	Potato	plasma membrane	60.47	60.82
PGSC0003DMT400081426	Potato	mitochondrion	56.59	55.83
PGSC0003DMT400057709	Potato	plasma membrane	54.26	53.54
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	52.13	53.16
PGSC0003DMT400012931	Potato	plasma membrane	52.91	52.1
PGSC0003DMT400064478	Potato	plasma membrane	50.78	51.17
PGSC0003DMT400064529	Potato	plasma membrane	50.78	51.17
PGSC0003DMT400094737	Potato	golgi, plasma membrane, vacuole	51.94	50.76
PGSC0003DMT400048537	Potato	plasma membrane	49.22	49.9
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	49.03	49.71
PGSC0003DMT400034820	Potato	plasma membrane	46.51	49.28
PGSC0003DMT400030841	Potato	plasma membrane	45.54	48.06
PGSC0003DMT400034821	Potato	plasma membrane	43.02	47.33
PGSC0003DMT400016373	Potato	plasma membrane	46.12	46.3
GSMUA_Achr8P27410_001	Banana	golgi, peroxisome, plasma membrane	57.75	42.88

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102590691	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M1CMC2	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG400027425	PGSC:PGSC0003DMG400027425	EnsemblPlants:PGSC0003DMT400070558	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF14	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0002953395	RefSeq:XP_006338150.1	SEG:seg	:

Description

Sugar transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400027425]

Coordinates

chr5:+:18715178..18721460

Molecular Weight (calculated)

56629.9 Da

IEP (calculated)

8.845

GRAVY (calculated)

0.474

Length

516 amino acids

Sequence
(BLAST)

001: MAGGGFSDDK GGKRAHLYEY KITGYFIFAC VVAAMGGSLF GYDLGVSGGV TSMDDFLKEF FPKVYRRKHA HLKETDYCKY DNQILTLFTS SLYFAALVST
101: FGASHVTRNK GRRASILCGA VSFFLGAILN AFAKNIAMLI VGRCLLGVGI GFGNQAVPLY LSEMAPAKVR GAVNQLFQLT TCLGILIANF INYATDKIHP
201: WGWRLSLGLA TVPATVMFIG GLFLPETPNS LVEQGKLQEA RQVLEKIRGT TKVDAEFADL KDASDAARAI KDPFRNLLKR KNRPQLVIAA LGIPAFQQLT
301: GMNSILFYAP VIFQSLGFGS GASLYSSAIT SGALVLATFI SMAFVDKFGR RAFFLEAGVE MICVLVAVAV TLALKFGEGE ELPKGIGIFL VVIICIFVVA
401: YGRSWGPLGW LVPSELFPLE TRSAGQSMVV CVNMIFTALI AQCFLASLCH LKYGIFLLFA GLIFIMSCFI FFLLPETKQV PIEEIYLLWQ NHWFWKRYCT
501: PEENERGLDA KSLPPI

Best Arabidopsis Sequence Match ( AT1G77210.1 )
(BLAST)

001: MAGGALTDEG GLKRAHLYEH RITSYFIFAC IVGSMGGSLF GYDLGVSGGV TSMDDFLKEF FPGIYKRKQM HLNETDYCKY DNQILTLFTS SLYFAGLIST
101: FGASYVTRIY GRRGSILVGS VSFFLGGVIN AAAKNILMLI LGRIFLGIGI GFGNQAVPLY LSEMAPAKIR GTVNQLFQLT TCIGILVANL INYKTEQIHP
201: WGWRLSLGLA TVPAILMFLG GLVLPETPNS LVEQGKLEKA KAVLIKVRGT NNIEAEFQDL VEASDAARAV KNPFRNLLAR RNRPQLVIGA IGLPAFQQLT
301: GMNSILFYAP VMFQSLGFGG SASLISSTIT NAALVVAAIM SMYSADKFGR RFLLLEASVE MFCYMVVVGV TLALKFGEGK ELPKSLGLIL VVLICLFVLA
401: YGRSWGPMGW LVPSELFPLE TRSAGQSVVV CVNLFFTALI AQCFLVSLCH LKYGIFLLFA GLILGMGSFV YFLLPETKQV PIEEVYLLWR QHWLWKKYVE
501: DVDE

Arabidopsis Description

STP14Sugar transport protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.