Factsheet for Solyc05g018230.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77210.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT1G77210.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070558	Potato	plasma membrane	99.02	78.68
Solyc12g008320.1.1	Tomato	plasma membrane	84.39	67.18
VIT_11s0016g03400.t01	Wine grape	plasma membrane	82.44	66.02
KRH39352	Soybean	plasma membrane	80.0	64.06
KRH76334	Soybean	plasma membrane	79.51	63.92
AT1G77210.1	Thale cress	plasma membrane	77.32	62.9
KRH60234	Soybean	mitochondrion	76.1	61.06
KRH41519	Soybean	plasma membrane	74.88	60.08
CDX87534	Canola	plasma membrane	70.0	59.67
GSMUA_Achr6P22680_001	Banana	plasma membrane	74.15	58.35
CDX88350	Canola	plasma membrane	72.2	57.93
Zm00001d005594_P001	Maize	plasma membrane	72.68	57.53
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	52.44	56.73
Zm00001d020071_P001	Maize	plasma membrane	71.71	56.32
TraesCS5B01G180800.1	Wheat	plasma membrane	71.71	55.68
TraesCS5D01G187100.1	Wheat	plasma membrane	71.71	55.58
TraesCS5A01G182600.1	Wheat	plasma membrane	71.71	55.58
HORVU5Hr1G055850.2	Barley	plasma membrane	71.22	55.09
Solyc07g006970.2.1	Tomato	plasma membrane	60.98	48.73
Solyc09g075820.2.1	Tomato	nucleus	57.8	45.32
Solyc02g079220.2.1	Tomato	nucleus	56.59	44.36
Solyc03g006650.1.1	Tomato	plasma membrane	54.39	43.05
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	52.93	42.97
Solyc03g078600.1.1	Tomato	plasma membrane	44.63	41.88
Solyc08g080300.1.1	Tomato	golgi, plasma membrane, vacuole	52.93	41.1
Solyc03g005140.1.1	Tomato	plasma membrane	48.54	40.86
Solyc03g093410.2.1	Tomato	plasma membrane	50.49	40.27
GSMUA_Achr8P27410_001	Banana	golgi, peroxisome, plasma membrane	67.56	39.86
Solyc06g054270.2.1	Tomato	plasma membrane	47.07	39.47
Solyc01g010530.1.1	Tomato	plasma membrane	44.63	37.42
Solyc03g005150.2.1	Tomato	plasma membrane	44.39	37.37
Solyc04g074070.1.1	Tomato	plasma membrane	44.63	35.95
Solyc03g093400.2.1	Tomato	plasma membrane	50.98	29.77

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659
InterPro:IPR020846	UniProt:K4BZ78	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF14	SUPFAM:SSF103473
EnsemblPlantsGene:Solyc05g018230.2	EnsemblPlants:Solyc05g018230.2.1	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TMHMM:TMhelix	UniParc:UPI0002767201
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:20267103..20269235

Molecular Weight (calculated)

44697.4 Da

IEP (calculated)

8.914

GRAVY (calculated)

0.597

Length

410 amino acids

Sequence
(BLAST)

001: MAGGGFSDDK GGKRAHLYEY KITGYFIFAC VVAAMGGSLF GYDLGVSGGV TSMDDFLKEF FPKVYRRKHA HLKETDYCKY DNQILTLFTS SLYFAALVST
101: FGASHVTRNK GRRASILCGA VSFFLGAILN AFAKNIAMLI LGRCLLGVGI GFGNQAVPLY LSEMAPKIRG TTKVDAEFAD LKDASDAARA IKDPFRNLLK
201: RKNRPQLVIA ALGIPAFQQL TGMNSILFYA PVIFQSLGFG SGASLYSSAI TSGALVLATF ISMAFVDKFG RRAFFLEAGV EMICVLVAVA VTLALKFGEG
301: EELPKGIGIF LVVIICIFVV AYGRSWGPLG WLVPSELFPL ETRSAGQSMV VCVNMIFTAL IAQCFLVSLC HLKYGIFLLF AGLIFIMSCF IFFLLPETKQ
401: VPIEEIYLRE

Best Arabidopsis Sequence Match ( AT1G77210.3 )
(BLAST)

001: MRLRLQAVPL YLSEMAPAKI RGTVNQLFQL TTCIGILVAN LINYKTEQIH PWGWRLSLGL ATVPAILMFL GGLVLPETPN SLVEQGKLEK AKAVLIKVRG
101: TNNIEAEFQD LVEASDAARA VKNPFRNLLA RRNRPQLVIG AIGLPAFQQL TGMNSILFYA PVMFQSLGFG GSASLISSTI TNAALVVAAI MSMYSADKFG
201: RRFLLLEASV EMFCYMVVVG VTLALKFGEG KELPKSLGLI LVVLICLFVL AYGRSWGPMG WLVPSELFPL ETRSAGQSVV VCVNLFFTAL IAQCFLVSLC
301: HLKYGIFLLF AGLILGMGSF VYFLLPETKQ VPIEEVYLLW RQHWLWKKYV EDVDE

Arabidopsis Description

STP14Sugar transport protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW61]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.