Factsheet for Solyc12g008320.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77210.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT1G77210.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000990	Potato	plasma membrane	88.16	98.27
Solyc05g018230.2.1	Tomato	plasma membrane	67.18	84.39
VIT_11s0016g03400.t01	Wine grape	plasma membrane	78.83	79.3
KRH76334	Soybean	plasma membrane	74.37	75.1
KRH39352	Soybean	plasma membrane	73.59	74.02
AT1G77210.1	Thale cress	plasma membrane	71.07	72.62
CDX87534	Canola	plasma membrane	66.99	71.73
GSMUA_Achr6P22680_001	Banana	plasma membrane	70.87	70.06
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	51.46	69.92
CDX88350	Canola	plasma membrane	69.13	69.67
KRH60234	Soybean	mitochondrion	68.16	68.69
KRH41519	Soybean	plasma membrane	67.96	68.49
Zm00001d005594_P001	Maize	plasma membrane	67.38	66.99
TraesCS5B01G180800.1	Wheat	plasma membrane	67.18	65.53
Zm00001d020071_P001	Maize	plasma membrane	66.41	65.52
TraesCS5D01G187100.1	Wheat	plasma membrane	67.18	65.41
TraesCS5A01G182600.1	Wheat	plasma membrane	66.99	65.22
HORVU5Hr1G055850.2	Barley	plasma membrane	66.8	64.91
Solyc07g006970.2.1	Tomato	plasma membrane	59.42	59.65
Solyc02g079220.2.1	Tomato	nucleus	55.34	54.49
Solyc09g075820.2.1	Tomato	nucleus	55.34	54.49
Solyc03g006650.1.1	Tomato	plasma membrane	53.01	52.7
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	51.26	52.28
Solyc08g080300.1.1	Tomato	golgi, plasma membrane, vacuole	51.26	50.0
Solyc03g005140.1.1	Tomato	plasma membrane	46.8	49.49
Solyc03g093410.2.1	Tomato	plasma membrane	49.32	49.42
Solyc03g078600.1.1	Tomato	plasma membrane	41.36	48.74
Solyc06g054270.2.1	Tomato	plasma membrane	46.02	48.47
Solyc04g074070.1.1	Tomato	plasma membrane	46.8	47.35
Solyc01g010530.1.1	Tomato	plasma membrane	44.47	46.83
Solyc03g005150.2.1	Tomato	plasma membrane	44.27	46.82
GSMUA_Achr8P27410_001	Banana	golgi, peroxisome, plasma membrane	56.31	41.73
Solyc03g093400.2.1	Tomato	plasma membrane	49.32	36.18

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EMBL:AB845650	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351
GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085
GO:GO:1902600	GO:GO:1904659	InterPro:IPR020846	UniProt:K4DBS0	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF14	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc12g008320.1	EnsemblPlants:Solyc12g008320.1.1	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00027693FA	SEG:seg	:

Description

Sugar transporter 18 [Source:UniProtKB/TrEMBL;Acc:K4DBS0]

Coordinates

chr12:+:1732691..1736090

Molecular Weight (calculated)

56478.8 Da

IEP (calculated)

8.771

GRAVY (calculated)

0.557

Length

515 amino acids

Sequence
(BLAST)

001: MAGGGFDDKS RGARAHLYEY KITSYFVCSC IVAAIGGSLF GYDLGISGGV TSMDDFLKIF FPEVYKRKQE HLKETDYCKY DNQILTLFTS SLYFAALISA
101: FGASHITRKK GRKASILCGA ISFFVGAVLN AAATNIAMLI IGRCLLGFGI GFSNQAVPLY LSEMAPAKVR GAVNQLFQLS TCLGVLIANF VNYGTAKIHP
201: WGWRLSLGIA TIPALFMFIG GLFLPETPNS LVEQGKLEQA RQVLEKVRGT TRVDAEFADL VDASNAARAI KHPFRNLLSR KNRPQLVIGA LAIPAFQQLS
301: GMNSILFYSP VIFQSLGFGS GAALYSSAIT GGALVIAALI SMTFVDKFGR RAFFLEAGVE MICVMVAVAI TLALEFGQGV ILPKGIGIFL VIIICIFVLA
401: YGRSWGPLGW LVPSEIFPLE TRSAGQSMVV CVNMIFTSLI AQCFLVSLCH LRYGVFLLFA GFIIIMTCFI YFLLPETKQV PIEEIYLLWE KHWFWKRYCS
501: SEENGIELKN GDLKV

Best Arabidopsis Sequence Match ( AT1G77210.1 )
(BLAST)

001: MAGGALTDEG GLKRAHLYEH RITSYFIFAC IVGSMGGSLF GYDLGVSGGV TSMDDFLKEF FPGIYKRKQM HLNETDYCKY DNQILTLFTS SLYFAGLIST
101: FGASYVTRIY GRRGSILVGS VSFFLGGVIN AAAKNILMLI LGRIFLGIGI GFGNQAVPLY LSEMAPAKIR GTVNQLFQLT TCIGILVANL INYKTEQIHP
201: WGWRLSLGLA TVPAILMFLG GLVLPETPNS LVEQGKLEKA KAVLIKVRGT NNIEAEFQDL VEASDAARAV KNPFRNLLAR RNRPQLVIGA IGLPAFQQLT
301: GMNSILFYAP VMFQSLGFGG SASLISSTIT NAALVVAAIM SMYSADKFGR RFLLLEASVE MFCYMVVVGV TLALKFGEGK ELPKSLGLIL VVLICLFVLA
401: YGRSWGPMGW LVPSELFPLE TRSAGQSVVV CVNLFFTALI AQCFLVSLCH LKYGIFLLFA GLILGMGSFV YFLLPETKQV PIEEVYLLWR QHWLWKKYVE
501: DVDE

Arabidopsis Description

STP14Sugar transport protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.