Factsheet for Solyc03g006650.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012931	Potato	plasma membrane	95.17	94.08
Solyc02g079220.2.1	Tomato	nucleus	85.71	84.89
VIT_00s0181g00010.t01	Wine grape	plasma membrane	78.76	78.61
AT4G21480.1	Thale cress	plasma membrane	75.1	77.49
KRH49937	Soybean	endoplasmic reticulum	77.22	77.22
KRH41938	Soybean	mitochondrion, nucleus	76.83	76.69
Bra031762.1-P	Field mustard	plasma membrane	76.83	76.39
CDY34842	Canola	plasma membrane	76.83	76.39
CDX97945	Canola	plasma membrane	76.83	76.25
Bra019870.1-P	Field mustard	plasma membrane	76.83	76.25
CDX79066	Canola	plasma membrane	75.29	76.02
Bra013529.1-P	Field mustard	plasma membrane	75.29	76.02
AT1G11260.1	Thale cress	plasma membrane	76.45	75.86
CDY19352	Canola	plasma membrane	76.45	75.86
CDX82827	Canola	golgi, plasma membrane, vacuole	74.9	75.63
CDY34655	Canola	plasma membrane	76.25	70.92
Solyc08g080300.1.1	Tomato	golgi, plasma membrane, vacuole	64.86	63.64
Solyc03g078600.1.1	Tomato	plasma membrane	50.58	59.95
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	57.53	59.01
Solyc07g006970.2.1	Tomato	plasma membrane	55.79	56.34
Solyc09g075820.2.1	Tomato	nucleus	55.02	54.49
Solyc05g018230.2.1	Tomato	plasma membrane	43.05	54.39
Solyc03g093410.2.1	Tomato	plasma membrane	53.86	54.28
Solyc12g008320.1.1	Tomato	plasma membrane	52.7	53.01
Solyc06g054270.2.1	Tomato	plasma membrane	48.46	51.33
Solyc03g005140.1.1	Tomato	plasma membrane	48.07	51.13
Solyc01g010530.1.1	Tomato	plasma membrane	47.68	50.51
Solyc04g074070.1.1	Tomato	plasma membrane	49.03	49.9
Solyc03g005150.2.1	Tomato	plasma membrane	46.53	49.49
Solyc03g093400.2.1	Tomato	plasma membrane	56.76	41.88

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659
InterPro:IPR020846	UniProt:K4BE88	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF357
SUPFAM:SSF103473	EnsemblPlantsGene:Solyc03g006650.1	EnsemblPlants:Solyc03g006650.1.1	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI0002767B7F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:+:1229172..1231694

Molecular Weight (calculated)

56907.4 Da

IEP (calculated)

8.710

GRAVY (calculated)

0.564

Length

518 amino acids

Sequence
(BLAST)

001: MAGGGGISNG NNGKEYPGNL TLYVTITCIV AAMGGLIFGY DIGISGGVTS MDTFLGKFFH SVYLKQKADT STNQYCKFDS QTLTMFTSSL YLAALCSSVV
101: ASTVTRKLGR KLSMLFGGIL FCAGALINGL AKDVAMLIVG RILLGFGIGF ANQSVPLYLS EMAPYKFRGA LNIGFQLSIT IGILVANVLN FFFAKLDNGW
201: RYSLGGAMVP GLIITVGSLL LPETPNSIIE RGNNEEAKMK LKRIRGVDDV DEEFNDLVVA SEASRKVEHP WKNLLQRKYR PHLTMAIAIP FFQQLTGINV
301: IMFYAPVLFK TIGFGADASL MSAVITGIVN VGATIVSIYY VDKLGRRFLF LEGGIQMLIC QIAVAICIGT KFGTDGYAGE LPKWYATLVV IFICIYVAGF
401: AWSWGPLGWL VPSEIFPLEI RSAAQSINVS VNMIFTFIVA QVFLTLLCHL KFGLFIFFAF FVCVMTIFIY LFLPETKNVP IEEMVVVWKQ HWFWSRFMTQ
501: VDYPGAAADV EMAKGRAN

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.