Factsheet for Bra013529.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79066	Canola	plasma membrane	100.0	100.0
AT4G21480.1	Thale cress	plasma membrane	88.3	90.24
VIT_00s0181g00010.t01	Wine grape	plasma membrane	79.53	78.61
Bra031762.1-P	Field mustard	plasma membrane	79.73	78.5
Bra019870.1-P	Field mustard	plasma membrane	79.34	77.97
PGSC0003DMT400012931	Potato	plasma membrane	77.0	75.38
Solyc03g006650.1.1	Tomato	plasma membrane	76.02	75.29
PGSC0003DMT400057709	Potato	plasma membrane	75.05	73.61
Solyc02g079220.2.1	Tomato	nucleus	75.05	73.61
Bra039642.1-P	Field mustard	golgi, plasma membrane, vacuole	60.43	60.08
Bra038245.1-P	Field mustard	plasma membrane	59.45	59.69
Bra038243.1-P	Field mustard	plasma membrane	59.45	59.69
Bra018841.1-P	Field mustard	golgi, plasma membrane, vacuole	59.65	59.3
Bra001766.1-P	Field mustard	plasma membrane	59.26	59.14
Bra038242.1-P	Field mustard	plasma membrane	58.09	57.98
Bra013029.1-P	Field mustard	golgi, plasma membrane, vacuole	42.3	57.56
Bra022468.1-P	Field mustard	plasma membrane	53.02	56.31
Bra036575.1-P	Field mustard	peroxisome, plasma membrane, vacuole	57.31	55.26
Bra036297.1-P	Field mustard	plasma membrane	53.02	53.54
Bra000898.1-P	Field mustard	plasma membrane	52.83	52.83
Bra009892.1-P	Field mustard	plasma membrane	50.88	52.3
Bra012948.1-P	Field mustard	plasma membrane	51.27	51.77
Bra040241.1-P	Field mustard	plasma membrane	50.49	51.08
Bra020794.1-P	Field mustard	golgi, plasma membrane, vacuole	50.1	50.99
Bra001176.1-P	Field mustard	golgi, plasma membrane, vacuole	50.29	50.79
Bra030678.1-P	Field mustard	plasma membrane	48.93	50.4
Bra037298.1-P	Field mustard	plasma membrane	46.78	48.88
Bra036755.1-P	Field mustard	plasma membrane	48.15	43.79

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EnsemblPlantsGene:Bra013529	EnsemblPlants:Bra013529.1	EnsemblPlants:Bra013529.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4DAL9	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879
TMHMM:TMhelix	UniParc:UPI0002546F9A	SEG:seg	:	:	:

Description

AT4G21480 (E=7e-260) | carbohydrate transmembrane transporter/ sugar:hydrogen symporter

Coordinates

chrA01:-:6152986..6155892

Molecular Weight (calculated)

56729.2 Da

IEP (calculated)

8.244

GRAVY (calculated)

0.551

Length

513 amino acids

Sequence
(BLAST)

001: MPAVGIVIGD GNREYPGKLT LYVTMTCIVA AMGGLIFGYD IGISGGVTTM DSFQKEFFPS VYEKQKNDQE SSKYCKFDSI PLTLFTSSLY LAALCSCVVA
101: SYVTREFGRK LSMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVASVLNF FFSKIPGGWG
201: WRLSLGGAVV PALIITVGSL ILPDTPNSMI ERGRFKQAET KLRKIRGVDD VEDEMNDLIA ASEASKLVEH PWRNLLQRKY RPHLTMAILI PSFQQLTGIN
301: VIMFYAPVLF QTIGFENDAA LMSAVVTGLV NVGATVVSIY GVDKWGRRFL FLEGGLQMLI SQIAVAAAIG AKFGVDGNPG VLPKWYAIVV VLFICIYVAA
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSVTV SMNMIFTFII AQVFLMMLCH MKFGLFIFFA FFVAVMSVFI YVFLPETRGV PIEEMNQVWR SHWYWSRFVE
501: GDENGRVEMG KVH

Best Arabidopsis Sequence Match ( AT4G21480.1 )
(BLAST)

001: MPSVGIVIGD GKKEYPGKLT LYVTVTCIVA AMGGLIFGYD IGISGGVTTM DSFQQKFFPS VYEKQKKDHD SNQYCRFDSV SLTLFTSSLY LAALCSSLVA
101: SYVTRQFGRK ISMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVANVLNF FFSKISWGWR
201: LSLGGAVVPA LIITVGSLIL PDTPNSMIER GQFRLAEAKL RKIRGVDDID DEINDLIIAS EASKLVEHPW RNLLQRKYRP HLTMAILIPA FQQLTGINVI
301: MFYAPVLFQT IGFGSDAALI SAVVTGLVNV GATVVSIYGV DKWGRRFLFL EGGFQMLISQ VAVAAAIGAK FGVDGTPGVL PKWYAIVVVL FICIYVAAFA
401: WSWGPLGWLV PSEIFPLEIR SAAQSITVSV NMIFTFLIAQ VFLMMLCHLK FGLFIFFAFF VVVMSIFVYL FLPETRGVPI EEMNRVWRSH WYWSKFVDAR
501: RI

Arabidopsis Description

STP12STP12 [Source:UniProtKB/TrEMBL;Acc:A0A178V2V7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.