Factsheet for Bra001176.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
plastid 3
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49992	Canola	golgi, plasma membrane, vacuole	99.21	99.21
CDX74116	Canola	plasma membrane	98.82	98.82
Bra040241.1-P	Field mustard	plasma membrane	92.13	92.31
Bra020794.1-P	Field mustard	golgi, plasma membrane, vacuole	90.16	90.87
AT3G05960.1	Thale cress	plasma membrane	89.17	89.35
Bra009892.1-P	Field mustard	plasma membrane	79.33	80.76
GSMUA_Achr9P11150_001	Banana	plasma membrane	65.75	65.62
GSMUA_Achr11P...	Banana	plasma membrane	65.16	65.16
TraesCS1A01G341100.1	Wheat	plasma membrane	61.81	61.45
TraesCS1D01G343200.1	Wheat	plasma membrane	61.81	61.45
TraesCS1B01G353800.1	Wheat	plasma membrane	61.42	61.06
Zm00001d019138_P001	Maize	plasma membrane	61.22	60.62
EER98187	Sorghum	plasma membrane	60.83	60.35
GSMUA_Achr11P...	Banana	plasma membrane	61.42	57.25
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	61.81	56.99
Bra036575.1-P	Field mustard	peroxisome, plasma membrane, vacuole	58.27	55.64
Bra030678.1-P	Field mustard	plasma membrane	54.53	55.62
Bra039642.1-P	Field mustard	golgi, plasma membrane, vacuole	53.35	52.52
Bra018841.1-P	Field mustard	golgi, plasma membrane, vacuole	52.95	52.13
Bra038243.1-P	Field mustard	plasma membrane	51.77	51.47
Bra038245.1-P	Field mustard	plasma membrane	51.77	51.47
Bra000898.1-P	Field mustard	plasma membrane	51.57	51.07
Bra036297.1-P	Field mustard	plasma membrane	50.98	50.98
Bra013529.1-P	Field mustard	plasma membrane	50.79	50.29
Bra001766.1-P	Field mustard	plasma membrane	50.2	49.61
Bra038242.1-P	Field mustard	plasma membrane	49.61	49.03
Bra019870.1-P	Field mustard	plasma membrane	50.0	48.66
Bra013029.1-P	Field mustard	golgi, plasma membrane, vacuole	36.02	48.54
Bra031762.1-P	Field mustard	plasma membrane	49.41	48.18
Bra022468.1-P	Field mustard	plasma membrane	45.08	47.41
Bra037298.1-P	Field mustard	plasma membrane	45.08	46.64
Bra012948.1-P	Field mustard	plasma membrane	44.29	44.29
Bra036755.1-P	Field mustard	plasma membrane	45.08	40.6

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EnsemblPlantsGene:Bra001176	EnsemblPlants:Bra001176.1	EnsemblPlants:Bra001176.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4CAE7	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF77	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI0002540AA1	SEG:seg	:	:	:	:

Description

AT3G05960 (E=2e-255) ATSTP6, STP6 | STP6 (SUGAR TRANSPORTER 6); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sugar:hydrogen symporter

Coordinates

chrA03:-:15134241..15136887

Molecular Weight (calculated)

55760.1 Da

IEP (calculated)

8.201

GRAVY (calculated)

0.600

Length

508 amino acids

Sequence
(BLAST)

001: MAVVVSANGN GPAFEAKMTV YVFVCVLIAA VGGLIFGYDI GISGGVTAMD DFLKKFFPTV WERKQHAHEN NYCKYDNQHL QLFTSSLYLA ALVASFLASA
101: VCSKLGRKPT MQFASVFFLI GVGLAAGADN IVMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PAQLRGGLNI VFQLMVTIGI LIANLVNYFT ATVHPNGWRI
201: ALGGAAIPAV ILLLGSLIIC ETPTSLIERN KNEEGRETLR KIRGVEDIND EYESIVHACE IASQVKDPYR KLLKPASRPP LIIGMLLQLF QQFSGINAIM
301: FYAPVLFQTV GFGNNAALLS AVITGSINVL STFVGIYLVD RTGRRFLLLQ SSVHMLISQL IIGIILAKDL GITGTLGKAQ AMVVVVFVCA YVMGFAWSWG
401: PLGWLIPSET FPLETRSAGF PVAVSCNMLF TFVIAQAFLS MLCGMRSGIF FFFSAWIIVM GLFALFFIPE TKGVAIDDVR ERVWKPHWFW KRYMLAEDDH
501: QDVEKRTE

Best Arabidopsis Sequence Match ( AT3G05960.1 )
(BLAST)

001: MAVVVSNANA PAFEAKMTVY VFICVMIAAV GGLIFGYDIG ISGGVSAMDD FLKEFFPAVW ERKKHVHENN YCKYDNQFLQ LFTSSLYLAA LVASFVASAT
101: CSKLGRRPTM QFASIFFLIG VGLTAGAVNL VMLIIGRLFL GFGVGFGNQA VPLFLSEIAP AQLRGGLNIV FQLMVTIGIL IANIVNYFTA TVHPYGWRIA
201: LGGAGIPAVI LLFGSLLIIE TPTSLIERNK NEEGKEALRK IRGVDDINDE YESIVHACDI ASQVKDPYRK LLKPASRPPF IIGMLLQLFQ QFTGINAIMF
301: YAPVLFQTVG FGSDAALLSA VITGSINVLA TFVGIYLVDR TGRRFLLLQS SVHMLICQLI IGIILAKDLG VTGTLGRPQA LVVVIFVCVY VMGFAWSWGP
401: LGWLIPSETF PLETRSAGFA VAVSCNMFFT FVIAQAFLSM LCGMRSGIFF FFSGWIIVMG LFAFFFIPET KGIAIDDMRE SVWKPHWFWK RYMLPEDDHH
501: DIEKRNA

Arabidopsis Description

STP6Sugar transport protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFG0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.