Factsheet for Bra040241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 3
endoplasmic reticulum 3
plasma membrane 5
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18836	Canola	plasma membrane	99.41	99.41
Bra020794.1-P	Field mustard	golgi, plasma membrane, vacuole	93.1	93.65
Bra001176.1-P	Field mustard	golgi, plasma membrane, vacuole	92.31	92.13
AT3G05960.1	Thale cress	plasma membrane	91.52	91.52
Bra009892.1-P	Field mustard	plasma membrane	78.5	79.76
GSMUA_Achr11P...	Banana	plasma membrane	65.09	64.96
GSMUA_Achr9P11150_001	Banana	plasma membrane	64.89	64.64
TraesCS1D01G343200.1	Wheat	plasma membrane	61.34	60.86
TraesCS1A01G341100.1	Wheat	plasma membrane	61.34	60.86
TraesCS1B01G353800.1	Wheat	plasma membrane	60.95	60.47
EER98187	Sorghum	plasma membrane	60.16	59.57
Zm00001d019138_P001	Maize	plasma membrane	59.96	59.26
GSMUA_Achr11P...	Banana	plasma membrane	61.54	57.25
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	61.54	56.62
Bra036575.1-P	Field mustard	peroxisome, plasma membrane, vacuole	58.19	55.45
Bra030678.1-P	Field mustard	plasma membrane	54.24	55.22
Bra039642.1-P	Field mustard	golgi, plasma membrane, vacuole	54.64	53.68
Bra018841.1-P	Field mustard	golgi, plasma membrane, vacuole	53.85	52.91
Bra038243.1-P	Field mustard	plasma membrane	52.66	52.25
Bra038245.1-P	Field mustard	plasma membrane	52.66	52.25
Bra036297.1-P	Field mustard	plasma membrane	51.48	51.38
Bra001766.1-P	Field mustard	plasma membrane	52.07	51.36
Bra000898.1-P	Field mustard	plasma membrane	51.68	51.07
Bra013529.1-P	Field mustard	plasma membrane	51.08	50.49
Bra038242.1-P	Field mustard	plasma membrane	51.08	50.39
Bra019870.1-P	Field mustard	plasma membrane	51.48	50.0
Bra031762.1-P	Field mustard	plasma membrane	51.08	49.71
Bra022468.1-P	Field mustard	plasma membrane	46.35	48.65
Bra013029.1-P	Field mustard	golgi, plasma membrane, vacuole	35.9	48.28
Bra037298.1-P	Field mustard	plasma membrane	45.56	47.05
Bra012948.1-P	Field mustard	plasma membrane	43.39	43.31
Bra036755.1-P	Field mustard	plasma membrane	45.17	40.6

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EnsemblPlantsGene:Bra040241	EnsemblPlants:Bra040241.1	EnsemblPlants:Bra040241.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4FGL3	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF77	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI0002544CE7	SEG:seg	:	:	:	:

Description

AT3G05960 (E=3e-264) ATSTP6, STP6 | STP6 (SUGAR TRANSPORTER 6); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sugar:hydrogen symporter

Coordinates

chrA01:+:28276816..28278657

Molecular Weight (calculated)

55949.5 Da

IEP (calculated)

8.604

GRAVY (calculated)

0.625

Length

507 amino acids

Sequence
(BLAST)

001: MAVVVSSSGN APAFKAKMTV YVFVCVVIAA FGGLIFGYDI GISGGVTAMD DFLKKFFPSV WEKKQHVHEN NYCKYDNQFL QLFTSSLYLA ALVASFLASA
101: VCSKLGRKPT MQFASIFFLI GVGLTAGAVN IVMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PAQLRGGLNI VFQLMVTIGI FIANLVNYFT ATVHPNGWRI
201: ALGGAAIPAV ILLFGSLIIC ETPTSLIERN KNEEGKEALR KIRGVDDINE EYESIVNACE IASQVKDPYR KLLKPASRPP FIIGMLLQLF QQFTGINAIM
301: FYAPVLFQTV GFGSDAALLS AVITGVINVL STFVGIYLVD RTGRRFLLLQ SSVHMLICQL IIGIILAKDL GTTGTLGKPQ ALVVVIFVCV YVMGFAWSWG
401: PLGWLIPSET FPLETRSAGF AVEVSCNMFF KFVIAQAFLS MLCGMRSGIF FFFSAWIIVM GLFAMFFIPE TKGVPIDEMR ERVWKPHWFW KRYMLAEDDH
501: QDVEKRT

Best Arabidopsis Sequence Match ( AT3G05960.1 )
(BLAST)

001: MAVVVSNANA PAFEAKMTVY VFICVMIAAV GGLIFGYDIG ISGGVSAMDD FLKEFFPAVW ERKKHVHENN YCKYDNQFLQ LFTSSLYLAA LVASFVASAT
101: CSKLGRRPTM QFASIFFLIG VGLTAGAVNL VMLIIGRLFL GFGVGFGNQA VPLFLSEIAP AQLRGGLNIV FQLMVTIGIL IANIVNYFTA TVHPYGWRIA
201: LGGAGIPAVI LLFGSLLIIE TPTSLIERNK NEEGKEALRK IRGVDDINDE YESIVHACDI ASQVKDPYRK LLKPASRPPF IIGMLLQLFQ QFTGINAIMF
301: YAPVLFQTVG FGSDAALLSA VITGSINVLA TFVGIYLVDR TGRRFLLLQS SVHMLICQLI IGIILAKDLG VTGTLGRPQA LVVVIFVCVY VMGFAWSWGP
401: LGWLIPSETF PLETRSAGFA VAVSCNMFFT FVIAQAFLSM LCGMRSGIFF FFSGWIIVMG LFAFFFIPET KGIAIDDMRE SVWKPHWFWK RYMLPEDDHH
501: DIEKRNA

Arabidopsis Description

STP6Sugar transport protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFG0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.