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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49992 Canola golgi, plasma membrane, vacuole 99.21 99.21
Bra001176.1-P Field mustard golgi, plasma membrane, vacuole 98.82 98.82
CDY18836 Canola plasma membrane 91.93 92.11
CDY27726 Canola golgi, plasma membrane, vacuole 89.76 90.48
CDY05216 Canola plasma membrane 89.37 90.08
AT3G05960.1 Thale cress plasma membrane 88.78 88.95
CDY52634 Canola plasma membrane 79.53 80.64
CDX88227 Canola plasma membrane 78.94 80.36
GSMUA_Achr9P11150_001 Banana plasma membrane 65.35 65.23
GSMUA_Achr11P... Banana plasma membrane 64.76 64.76
TraesCS1D01G343200.1 Wheat plasma membrane 62.01 61.64
TraesCS1A01G341100.1 Wheat plasma membrane 62.01 61.64
TraesCS1B01G353800.1 Wheat plasma membrane 61.61 61.25
Zm00001d019138_P001 Maize plasma membrane 61.22 60.62
EER98187 Sorghum plasma membrane 60.83 60.35
CDY68476 Canola plasma membrane 12.6 58.18
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 62.01 57.17
CDY67102 Canola cytosol, plasma membrane, vacuole 56.5 57.06
GSMUA_Achr11P... Banana plasma membrane 61.02 56.88
CDX80558 Canola plasma membrane 56.1 56.21
CDY10269 Canola plasma membrane 55.12 56.11
CDY06700 Canola plasma membrane 54.92 55.91
CDX86492 Canola plasma membrane 54.72 55.82
CDY15608 Canola plasma membrane 54.53 55.62
CDY19773 Canola plasma membrane 58.07 55.45
CDX87052 Canola peroxisome, plasma membrane, vacuole 57.87 55.26
CDY62955 Canola extracellular, plasma membrane 22.05 53.85
CDY53930 Canola golgi, plasma membrane, vacuole 53.15 52.33
CDY29325 Canola golgi, plasma membrane, vacuole 53.15 52.33
CDY22788 Canola golgi, plasma membrane, vacuole 52.76 51.94
CDY42509 Canola golgi, plasma membrane, vacuole 52.76 51.94
CDY66084 Canola golgi, plasma membrane, vacuole 37.4 51.49
CDY33432 Canola plasma membrane 51.57 51.27
CDY33434 Canola plasma membrane 51.57 51.27
CDX90958 Canola plasma membrane 51.57 51.07
CDY62951 Canola plasma membrane 43.7 51.03
CDY33431 Canola plasma membrane 42.91 50.82
CDX82272 Canola plasma membrane 42.91 50.82
CDY22024 Canola plasma membrane 50.79 50.79
CDY07098 Canola plasma membrane 50.79 50.79
CDY25359 Canola plasma membrane 42.72 50.58
CDY36072 Canola plasma membrane 42.52 50.35
CDY38688 Canola plasma membrane 42.72 50.35
CDX79066 Canola plasma membrane 50.59 50.1
CDX82827 Canola golgi, plasma membrane, vacuole 50.39 49.9
CDY62952 Canola golgi, plasma membrane, vacuole 51.38 49.62
CDY33433 Canola cytosol, peroxisome, plasma membrane 28.74 49.32
CDY24593 Canola plasma membrane 42.72 49.32
CDX97945 Canola plasma membrane 50.2 48.85
CDY02218 Canola plasma membrane 41.34 48.61
CDY19352 Canola plasma membrane 49.8 48.47
CDY34842 Canola plasma membrane 49.61 48.37
CDY45759 Canola plasma membrane 48.62 47.32
CDY26777 Canola plasma membrane 42.72 47.17
CDY47467 Canola plasma membrane 45.28 46.84
CDX87534 Canola plasma membrane 44.29 46.78
CDX88350 Canola plasma membrane 46.06 45.79
CDY34655 Canola plasma membrane 49.41 45.06
CDY66862 Canola plasma membrane 44.69 44.86
CDY23062 Canola golgi, plasma membrane, vacuole 37.2 44.26
CDX91766 Canola golgi, plasma membrane, vacuole 43.9 44.25
CDY02138 Canola golgi, plasma membrane, vacuole 37.01 44.03
CDY62956 Canola cytosol 3.15 39.02
CDX91815 Canola plasma membrane 51.57 31.19
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078CAK9EnsemblPlants:CDX74116ProteinID:CDX74116ProteinID:CDX74116.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00111872001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF77SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI0004EEED90SEG:seg:::
Description
BnaA03g29310D
Coordinates
chrLK031800:+:1406511..1409438
Molecular Weight (calculated)
55757.0 Da
IEP (calculated)
8.377
GRAVY (calculated)
0.603
Length
508 amino acids
Sequence
(BLAST)
001: MAVVVSANGK GPAFEAKMTV YVFVCVLISA VGGLIFGYDI GISGGVTAMD DFLKKFFPTV WERKQHAHEN NYCKYDNQHL QLFTSSLYLA ALVASFLASA
101: VCSKLGRKPT MQFASVFFLI GVGLAAGADN IVMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PAQLRGGLNI VFQLMVTIGI LIANLVNYFT ATVHPNGWRF
201: ALGGAAIPAV ILLLGSLIIC ETPTSLIERN KNEEGRETLR KIRGVEDIND EYESIVHACE IASQVKDPYR KLLKPASRPP LIIGMLLQLF QQFSGINAIM
301: FYAPVLFQTV GFGSNAALLS AVVTGSINVL STFVGIYLVD RTGRRFLLLQ SSVHMLISQL IIGIILAKDL GITGTLGKAQ AMVVVVFVCA YVMGFAWSWG
401: PLGWLIPSET FPLETRSAGF AVAVSCNMLF TFVIAQAFLS MLCGMRSGIF FFFSAWIIVM GLFALFFIPE TKGVAIDDVR ERVWKPHWFW KRYMLAEDDH
501: QDVEKRTE
Best Arabidopsis Sequence Match ( AT3G05960.1 )
(BLAST)
001: MAVVVSNANA PAFEAKMTVY VFICVMIAAV GGLIFGYDIG ISGGVSAMDD FLKEFFPAVW ERKKHVHENN YCKYDNQFLQ LFTSSLYLAA LVASFVASAT
101: CSKLGRRPTM QFASIFFLIG VGLTAGAVNL VMLIIGRLFL GFGVGFGNQA VPLFLSEIAP AQLRGGLNIV FQLMVTIGIL IANIVNYFTA TVHPYGWRIA
201: LGGAGIPAVI LLFGSLLIIE TPTSLIERNK NEEGKEALRK IRGVDDINDE YESIVHACDI ASQVKDPYRK LLKPASRPPF IIGMLLQLFQ QFTGINAIMF
301: YAPVLFQTVG FGSDAALLSA VITGSINVLA TFVGIYLVDR TGRRFLLLQS SVHMLICQLI IGIILAKDLG VTGTLGRPQA LVVVIFVCVY VMGFAWSWGP
401: LGWLIPSETF PLETRSAGFA VAVSCNMFFT FVIAQAFLSM LCGMRSGIFF FFSGWIIVMG LFAFFFIPET KGIAIDDMRE SVWKPHWFWK RYMLPEDDHH
501: DIEKRNA
Arabidopsis Description
STP6Sugar transport protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFG0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.