Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79066 | Canola | plasma membrane | 98.05 | 98.05 |
| AT4G21480.1 | Thale cress | plasma membrane | 88.5 | 90.44 |
| CDY34842 | Canola | plasma membrane | 79.73 | 78.5 |
| VIT_00s0181g00010.t01 | Wine grape | plasma membrane | 79.34 | 78.42 |
| CDX97945 | Canola | plasma membrane | 79.53 | 78.16 |
| CDY19352 | Canola | plasma membrane | 79.53 | 78.16 |
| PGSC0003DMT400012931 | Potato | plasma membrane | 76.61 | 75.0 |
| Solyc03g006650.1.1 | Tomato | plasma membrane | 75.63 | 74.9 |
| PGSC0003DMT400057709 | Potato | plasma membrane | 75.05 | 73.61 |
| CDY34655 | Canola | plasma membrane | 79.73 | 73.43 |
| Solyc02g079220.2.1 | Tomato | nucleus | 74.66 | 73.23 |
| CDY62955 | Canola | extracellular, plasma membrane | 25.73 | 63.46 |
| CDY33433 | Canola | cytosol, peroxisome, plasma membrane | 35.48 | 61.49 |
| CDY53930 | Canola | golgi, plasma membrane, vacuole | 61.01 | 60.66 |
| CDY29325 | Canola | golgi, plasma membrane, vacuole | 60.82 | 60.47 |
| CDY66084 | Canola | golgi, plasma membrane, vacuole | 43.27 | 60.16 |
| CDY33432 | Canola | plasma membrane | 59.65 | 59.88 |
| CDY02218 | Canola | plasma membrane | 50.29 | 59.72 |
| CDY42509 | Canola | golgi, plasma membrane, vacuole | 60.04 | 59.69 |
| CDY22788 | Canola | golgi, plasma membrane, vacuole | 60.04 | 59.69 |
| CDY33434 | Canola | plasma membrane | 59.45 | 59.69 |
| CDY68476 | Canola | plasma membrane | 12.67 | 59.09 |
| CDY36072 | Canola | plasma membrane | 49.12 | 58.74 |
| CDX82272 | Canola | plasma membrane | 49.12 | 58.74 |
| CDY45759 | Canola | plasma membrane | 59.65 | 58.62 |
| CDY25359 | Canola | plasma membrane | 48.73 | 58.28 |
| CDY62951 | Canola | plasma membrane | 49.32 | 58.16 |
| CDY33431 | Canola | plasma membrane | 48.54 | 58.04 |
| CDY62952 | Canola | golgi, plasma membrane, vacuole | 59.45 | 57.98 |
| CDY38688 | Canola | plasma membrane | 48.34 | 57.54 |
| CDY24593 | Canola | plasma membrane | 48.73 | 56.82 |
| CDY67102 | Canola | cytosol, plasma membrane, vacuole | 54.97 | 56.06 |
| CDX87052 | Canola | peroxisome, plasma membrane, vacuole | 58.09 | 56.02 |
| CDY19773 | Canola | plasma membrane | 58.09 | 56.02 |
| CDX80558 | Canola | plasma membrane | 54.39 | 55.03 |
| CDY07098 | Canola | plasma membrane | 54.19 | 54.72 |
| CDY22024 | Canola | plasma membrane | 53.61 | 54.13 |
| CDX90958 | Canola | plasma membrane | 53.41 | 53.41 |
| CDX88227 | Canola | plasma membrane | 50.88 | 52.3 |
| CDY23062 | Canola | golgi, plasma membrane, vacuole | 43.08 | 51.76 |
| CDY52634 | Canola | plasma membrane | 50.49 | 51.7 |
| CDY02138 | Canola | golgi, plasma membrane, vacuole | 42.88 | 51.52 |
| CDY06700 | Canola | plasma membrane | 49.9 | 51.3 |
| CDY62956 | Canola | cytosol | 4.09 | 51.22 |
| CDY10269 | Canola | plasma membrane | 49.71 | 51.1 |
| CDY18836 | Canola | plasma membrane | 50.49 | 51.08 |
| CDY27726 | Canola | golgi, plasma membrane, vacuole | 49.9 | 50.79 |
| CDY05216 | Canola | plasma membrane | 49.9 | 50.79 |
| CDY49992 | Canola | golgi, plasma membrane, vacuole | 50.1 | 50.59 |
| CDX86492 | Canola | plasma membrane | 48.93 | 50.4 |
| CDX74116 | Canola | plasma membrane | 49.9 | 50.39 |
| CDX87534 | Canola | plasma membrane | 47.17 | 50.31 |
| CDY15608 | Canola | plasma membrane | 48.54 | 50.0 |
| CDY66862 | Canola | plasma membrane | 48.54 | 49.21 |
| CDX91766 | Canola | golgi, plasma membrane, vacuole | 48.34 | 49.21 |
| CDY47467 | Canola | plasma membrane | 46.78 | 48.88 |
| CDX88350 | Canola | plasma membrane | 48.54 | 48.73 |
| CDY26777 | Canola | plasma membrane | 43.66 | 48.7 |
| CDX91815 | Canola | plasma membrane | 53.02 | 32.38 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.6 | GO:A0A078D121 | EnsemblPlants:CDX82827 | ProteinID:CDX82827 | ProteinID:CDX82827.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00138168001 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 |
| PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF357 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TIGRFAMs:TIGR00879 | TMHMM:TMhelix | UniParc:UPI0004EE3857 | SEG:seg | : | : |
Description
BnaC01g12770D
Coordinates
chrLK031830:-:573473..576082
Molecular Weight (calculated)
56607.1 Da
IEP (calculated)
8.601
GRAVY (calculated)
0.562
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAVGIVIGD GNREYPGKLT LYVTMTCIVA AMGGLIFGYD IGISGGVTTM ESFQKEFFPS VYEKQKNDHE SNKYCKFDSI PLTLFTSSLY LAALCSCVVA
101: SYVTRAFGRK LSMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVASVLNF FFSKIPGGWG
201: WRLSLGGAVV PALIITVGSL VLPDTPNSMI ERGRFKQAET KLRKIRGVDN VEDEMDDLIA ASEASKLVEH PWRNLLQRKY RPHLTMAILI PSFQQLTGIN
301: VIMFYAPVLF QTIGFGNDAA LMSAVVTGLV NVGATVVSIY GVDKWGRRFL FLEGGLQMLI SQVAVAAAIG AKFGVDGNPG VLPKWYAIVV VLFICIYVAA
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSVTV SMNMIFTFII AQVFLMMLCH MKFGLFIFFA FFVAVMSVFI YVFLPETRGV PIEEMNQVWR SHWYWSRFVD
501: GDENGRVEMG KVH
101: SYVTRAFGRK LSMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVASVLNF FFSKIPGGWG
201: WRLSLGGAVV PALIITVGSL VLPDTPNSMI ERGRFKQAET KLRKIRGVDN VEDEMDDLIA ASEASKLVEH PWRNLLQRKY RPHLTMAILI PSFQQLTGIN
301: VIMFYAPVLF QTIGFGNDAA LMSAVVTGLV NVGATVVSIY GVDKWGRRFL FLEGGLQMLI SQVAVAAAIG AKFGVDGNPG VLPKWYAIVV VLFICIYVAA
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSVTV SMNMIFTFII AQVFLMMLCH MKFGLFIFFA FFVAVMSVFI YVFLPETRGV PIEEMNQVWR SHWYWSRFVD
501: GDENGRVEMG KVH
001: MPSVGIVIGD GKKEYPGKLT LYVTVTCIVA AMGGLIFGYD IGISGGVTTM DSFQQKFFPS VYEKQKKDHD SNQYCRFDSV SLTLFTSSLY LAALCSSLVA
101: SYVTRQFGRK ISMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVANVLNF FFSKISWGWR
201: LSLGGAVVPA LIITVGSLIL PDTPNSMIER GQFRLAEAKL RKIRGVDDID DEINDLIIAS EASKLVEHPW RNLLQRKYRP HLTMAILIPA FQQLTGINVI
301: MFYAPVLFQT IGFGSDAALI SAVVTGLVNV GATVVSIYGV DKWGRRFLFL EGGFQMLISQ VAVAAAIGAK FGVDGTPGVL PKWYAIVVVL FICIYVAAFA
401: WSWGPLGWLV PSEIFPLEIR SAAQSITVSV NMIFTFLIAQ VFLMMLCHLK FGLFIFFAFF VVVMSIFVYL FLPETRGVPI EEMNRVWRSH WYWSKFVDAR
501: RI
101: SYVTRQFGRK ISMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVANVLNF FFSKISWGWR
201: LSLGGAVVPA LIITVGSLIL PDTPNSMIER GQFRLAEAKL RKIRGVDDID DEINDLIIAS EASKLVEHPW RNLLQRKYRP HLTMAILIPA FQQLTGINVI
301: MFYAPVLFQT IGFGSDAALI SAVVTGLVNV GATVVSIYGV DKWGRRFLFL EGGFQMLISQ VAVAAAIGAK FGVDGTPGVL PKWYAIVVVL FICIYVAAFA
401: WSWGPLGWLV PSEIFPLEIR SAAQSITVSV NMIFTFLIAQ VFLMMLCHLK FGLFIFFAFF VVVMSIFVYL FLPETRGVPI EEMNRVWRSH WYWSKFVDAR
501: RI
Arabidopsis Description
STP12STP12 [Source:UniProtKB/TrEMBL;Acc:A0A178V2V7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.