Factsheet for AT4G21480.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82827	Canola	golgi, plasma membrane, vacuole	90.44	88.5
CDX79066	Canola	plasma membrane	90.24	88.3
Bra013529.1-P	Field mustard	plasma membrane	90.24	88.3
VIT_00s0181g00010.t01	Wine grape	plasma membrane	79.88	77.26
AT1G11260.1	Thale cress	plasma membrane	79.88	76.82
Solyc03g006650.1.1	Tomato	plasma membrane	77.49	75.1
PGSC0003DMT400012931	Potato	plasma membrane	77.89	74.62
Solyc02g079220.2.1	Tomato	nucleus	77.29	74.19
PGSC0003DMT400057709	Potato	plasma membrane	77.09	74.0
AT3G19940.1	Thale cress	plasma membrane	61.95	60.51
AT3G19930.1	Thale cress	plasma membrane	61.75	60.31
AT5G23270.1	Thale cress	plasma membrane	61.16	59.73
AT1G50310.1	Thale cress	plasma membrane	61.16	59.38
AT5G26340.1	Thale cress	plasma membrane	57.57	54.94
AT4G02050.1	Thale cress	plasma membrane	54.78	53.61
AT1G07340.1	Thale cress	plasma membrane	50.8	51.2
AT1G77210.1	Thale cress	plasma membrane	51.2	50.99
AT5G61520.1	Thale cress	plasma membrane	52.19	50.97
AT5G26250.1	Thale cress	plasma membrane	51.2	50.69
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	50.6	50.2
AT3G05960.1	Thale cress	plasma membrane	50.4	49.9

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EntrezGene:828233	UniProt:A0A178V2V7	ArrayExpress:AT4G21480	EnsemblPlantsGene:AT4G21480
RefSeq:AT4G21480	TAIR:AT4G21480	RefSeq:AT4G21480-TAIR-G	EnsemblPlants:AT4G21480.1	TAIR:AT4G21480.1	Unigene:At.26447
GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0008643	GO:GO:0015293	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659
InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	RefSeq:NP_193879.4	ProteinID:OAO99402.1
PFAM:PF00083	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0005027	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	Symbol:STP12
InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001A7B0F9	SEG:seg

Description

STP12STP12 [Source:UniProtKB/TrEMBL;Acc:A0A178V2V7]

Coordinates

chr4:-:11433303..11435284

Molecular Weight (calculated)

55569.9 Da

IEP (calculated)

9.427

GRAVY (calculated)

0.645

Length

502 amino acids

Sequence
(BLAST)

001: MPSVGIVIGD GKKEYPGKLT LYVTVTCIVA AMGGLIFGYD IGISGGVTTM DSFQQKFFPS VYEKQKKDHD SNQYCRFDSV SLTLFTSSLY LAALCSSLVA
101: SYVTRQFGRK ISMLLGGVLF CAGALLNGFA TAVWMLIVGR LLLGFGIGFT NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVANVLNF FFSKISWGWR
201: LSLGGAVVPA LIITVGSLIL PDTPNSMIER GQFRLAEAKL RKIRGVDDID DEINDLIIAS EASKLVEHPW RNLLQRKYRP HLTMAILIPA FQQLTGINVI
301: MFYAPVLFQT IGFGSDAALI SAVVTGLVNV GATVVSIYGV DKWGRRFLFL EGGFQMLISQ VAVAAAIGAK FGVDGTPGVL PKWYAIVVVL FICIYVAAFA
401: WSWGPLGWLV PSEIFPLEIR SAAQSITVSV NMIFTFLIAQ VFLMMLCHLK FGLFIFFAFF VVVMSIFVYL FLPETRGVPI EEMNRVWRSH WYWSKFVDAR
501: RI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.