Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019870.1-P Field mustard plasma membrane 100.0 100.0
CDY19352 Canola plasma membrane 98.66 98.66
CDY34842 Canola plasma membrane 98.08 98.27
AT1G11260.1 Thale cress plasma membrane 96.74 96.74
CDY34655 Canola plasma membrane 97.89 91.74
VIT_00s0181g00010.t01 Wine grape plasma membrane 82.18 82.66
KRH49937 Soybean endoplasmic reticulum 80.46 81.08
KRH41938 Soybean mitochondrion, nucleus 79.31 79.77
CDX82827 Canola golgi, plasma membrane, vacuole 78.16 79.53
CDX79066 Canola plasma membrane 77.97 79.34
PGSC0003DMT400057709 Potato plasma membrane 78.16 78.01
Solyc02g079220.2.1 Tomato nucleus 77.59 77.44
PGSC0003DMT400012931 Potato plasma membrane 77.2 76.91
Solyc03g006650.1.1 Tomato plasma membrane 76.25 76.83
CDY62955 Canola extracellular, plasma membrane 25.48 63.94
CDY33433 Canola cytosol, peroxisome, plasma membrane 34.67 61.15
CDY53930 Canola golgi, plasma membrane, vacuole 60.34 61.05
CDY29325 Canola golgi, plasma membrane, vacuole 60.34 61.05
CDY33432 Canola plasma membrane 59.2 60.47
CDY42509 Canola golgi, plasma membrane, vacuole 59.77 60.47
CDY22788 Canola golgi, plasma membrane, vacuole 59.77 60.47
CDY66084 Canola golgi, plasma membrane, vacuole 42.72 60.43
CDY33434 Canola plasma membrane 59.0 60.27
CDY02218 Canola plasma membrane 49.81 60.19
CDY36072 Canola plasma membrane 49.43 60.14
CDX82272 Canola plasma membrane 49.23 59.91
CDY62951 Canola plasma membrane 49.62 59.54
CDY25359 Canola plasma membrane 48.85 59.44
CDY33431 Canola plasma membrane 48.85 59.44
CDY38688 Canola plasma membrane 48.66 58.93
CDY45759 Canola plasma membrane 58.81 58.81
CDY62952 Canola golgi, plasma membrane, vacuole 58.81 58.37
CDY24593 Canola plasma membrane 48.85 57.95
CDY07098 Canola plasma membrane 55.94 57.48
CDY22024 Canola plasma membrane 55.75 57.28
CDY68476 Canola plasma membrane 12.07 57.27
CDX87052 Canola peroxisome, plasma membrane, vacuole 57.66 56.58
CDY19773 Canola plasma membrane 57.66 56.58
CDX90958 Canola plasma membrane 55.56 56.53
CDY67102 Canola cytosol, plasma membrane, vacuole 54.21 56.26
CDY62956 Canola cytosol 4.41 56.1
CDX80558 Canola plasma membrane 53.83 55.42
CDX88227 Canola plasma membrane 50.19 52.51
CDY52634 Canola plasma membrane 50.19 52.3
CDY23062 Canola golgi, plasma membrane, vacuole 42.53 51.99
CDY02138 Canola golgi, plasma membrane, vacuole 42.34 51.76
CDY47467 Canola plasma membrane 48.66 51.73
CDY18836 Canola plasma membrane 50.19 51.68
CDY26777 Canola plasma membrane 45.4 51.52
CDY27726 Canola golgi, plasma membrane, vacuole 49.62 51.39
CDY05216 Canola plasma membrane 49.62 51.39
CDY66862 Canola plasma membrane 49.62 51.19
CDX87534 Canola plasma membrane 46.93 50.94
CDX91766 Canola golgi, plasma membrane, vacuole 49.04 50.79
CDX74116 Canola plasma membrane 48.85 50.2
CDY49992 Canola golgi, plasma membrane, vacuole 48.85 50.2
CDX88350 Canola plasma membrane 48.85 49.9
CDY06700 Canola plasma membrane 47.32 49.5
CDY10269 Canola plasma membrane 47.13 49.3
CDX86492 Canola plasma membrane 46.93 49.2
CDY15608 Canola plasma membrane 46.55 48.8
CDX91815 Canola plasma membrane 54.6 33.93
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078E748EnsemblPlants:CDX97945ProteinID:CDX97945ProteinID:CDX97945.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00105293001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000253EB0FSEG:seg::
Description
BnaA06g06960D
Coordinates
chrLK031902:+:178682..181700
Molecular Weight (calculated)
57445.8 Da
IEP (calculated)
9.186
GRAVY (calculated)
0.505
Length
522 amino acids
Sequence
(BLAST)
001: MAGGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLRRFFPS VYRKQQADAT TNQYCQYDSP TLTLFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITLGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWTNLLRRKY RPHLTMAIMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDKWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVIVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNGVEM GKSSSNQGTK HV
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.