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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45759 Canola plasma membrane 97.45 80.65
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 64.35 73.74
CDY62955 Canola extracellular, plasma membrane 34.26 71.15
AT5G23270.1 Thale cress plasma membrane 83.1 69.84
CDY68476 Canola plasma membrane 16.67 65.45
CDY29325 Canola golgi, plasma membrane, vacuole 70.83 59.3
CDY53930 Canola golgi, plasma membrane, vacuole 70.83 59.3
CDY22788 Canola golgi, plasma membrane, vacuole 69.68 58.33
CDY42509 Canola golgi, plasma membrane, vacuole 69.68 58.33
CDY33432 Canola plasma membrane 68.98 58.32
CDY33434 Canola plasma membrane 68.75 58.12
CDY33433 Canola cytosol, peroxisome, plasma membrane 38.89 56.76
CDY62952 Canola golgi, plasma membrane, vacuole 68.52 56.27
KRH40901 Soybean plasma membrane 66.67 56.25
KRH40905 Soybean plasma membrane 66.44 56.05
KRH36130 Soybean plasma membrane 65.51 55.38
CDY36072 Canola plasma membrane 54.63 55.01
KRG90624 Soybean plasma membrane 65.05 54.99
CDX82272 Canola plasma membrane 54.4 54.78
CDY25359 Canola plasma membrane 54.4 54.78
CDY33431 Canola plasma membrane 54.4 54.78
CDY38688 Canola plasma membrane 54.17 54.29
CDY62951 Canola plasma membrane 54.4 54.02
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 62.73 53.66
CDY24593 Canola plasma membrane 54.63 53.64
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 62.27 53.16
CDY66084 Canola golgi, plasma membrane, vacuole 45.14 52.85
TraesCS2A01G259500.1 Wheat plasma membrane 62.96 52.61
TraesCS2D01G264200.1 Wheat plasma membrane 62.96 52.61
TraesCS2B01G282400.1 Wheat plasma membrane 62.73 52.42
EER97830 Sorghum plasma membrane 62.73 52.12
Os07t0106200-02 Rice plasma membrane 62.04 51.74
TraesCS7A01G288800.1 Wheat plastid 61.11 51.66
Zm00001d018627_P001 Maize plasma membrane 62.5 51.63
TraesCS7D01G286600.1 Wheat plastid 60.88 51.47
Zm00001d049467_P001 Maize plasma membrane 61.11 51.36
TraesCS7B01G185800.1 Wheat plastid 60.65 51.27
Zm00001d021775_P001 Maize plasma membrane 61.34 50.57
Os07t0559700-00 Rice plasma membrane 61.81 50.38
CDX82827 Canola golgi, plasma membrane, vacuole 59.72 50.29
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 60.19 50.1
CDX97945 Canola plasma membrane 60.19 49.81
CDY34842 Canola plasma membrane 59.95 49.71
EES13444 Sorghum plasma membrane 59.95 49.71
CDX79066 Canola plasma membrane 59.03 49.71
GSMUA_Achr2P10700_001 Banana golgi, plasma membrane, vacuole 55.09 49.69
TraesCS2A01G205500.1 Wheat plasma membrane 60.42 49.62
CDY19352 Canola plasma membrane 59.95 49.62
EER99540 Sorghum golgi, plasma membrane, vacuole 60.88 49.53
HORVU7Hr1G069030.1 Barley plasma membrane 61.11 49.44
TraesCS2B01G232900.1 Wheat plasma membrane 59.95 49.24
Os01t0567500-01 Rice plasma membrane 58.33 49.12
TraesCS3A01G475400.1 Wheat peroxisome 31.71 49.1
TraesCS3D01G470200.1 Wheat plasma membrane 58.33 49.03
Os01t0567600-00 Rice plasma membrane 58.1 49.02
CDY02138 Canola golgi, plasma membrane, vacuole 48.38 48.95
HORVU3Hr1G102860.5 Barley plasma membrane 58.8 48.94
TraesCS3B01G518900.1 Wheat plasma membrane 58.1 48.83
TraesCS3B01G518800.1 Wheat plasma membrane 57.41 48.82
TraesCS3D01G470300.1 Wheat plasma membrane 57.41 48.82
HORVU2Hr1G041080.6 Barley plasma membrane 59.95 48.78
CDY23062 Canola golgi, plasma membrane, vacuole 48.15 48.71
TraesCS3A01G475200.1 Wheat plasma membrane 56.94 48.43
OQU85892 Sorghum plasma membrane 58.56 48.37
GSMUA_Achr4P29880_001 Banana plasma membrane 54.17 48.25
TraesCS5D01G001600.1 Wheat golgi, plasma membrane, vacuole 57.64 48.16
EES03141 Sorghum golgi, plasma membrane, vacuole 56.48 47.94
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 57.41 47.78
TraesCS5B01G001000.1 Wheat golgi, plasma membrane, vacuole 57.18 47.78
TraesCS5A01G001100.1 Wheat golgi, plasma membrane, vacuole 56.94 47.67
Zm00001d044245_P001 Maize plasma membrane 56.02 47.54
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 53.47 47.14
HORVU3Hr1G102840.5 Barley plasma membrane 57.41 46.97
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 56.94 46.68
CDY34655 Canola plasma membrane 60.19 46.68
CDY22024 Canola plasma membrane 54.86 46.65
CDY07098 Canola plasma membrane 54.63 46.46
Os03t0594400-01 Rice plasma membrane 56.02 46.36
CDX90958 Canola plasma membrane 54.86 46.2
Zm00001d032409_P001 Maize plasma membrane 56.94 45.9
Os09t0297300-00 Rice plasma membrane 55.32 45.7
CDY67102 Canola cytosol, plasma membrane, vacuole 52.78 45.33
EER93920 Sorghum golgi, plasma membrane, vacuole 55.79 45.22
CDY19773 Canola plasma membrane 55.09 44.74
CDX87052 Canola peroxisome, plasma membrane, vacuole 54.86 44.55
CDX80558 Canola plasma membrane 51.85 44.18
CDX88227 Canola plasma membrane 50.23 43.49
Os02t0160400-01 Rice plasma membrane 52.31 43.46
HORVU6Hr1G025520.1 Barley plasma membrane 52.55 43.4
TraesCS6A01G134000.1 Wheat plasma membrane 52.31 43.21
TraesCS6D01G123300.1 Wheat plasma membrane 52.31 43.21
CDX86492 Canola plasma membrane 49.77 43.17
CDY52634 Canola plasma membrane 50.0 43.11
TraesCS6B01G162200.1 Wheat plasma membrane 52.08 43.02
EES04558 Sorghum plasma membrane 51.85 42.99
CDY15608 Canola plasma membrane 49.31 42.77
CDY06700 Canola plasma membrane 49.31 42.69
CDY10269 Canola plasma membrane 49.31 42.69
CDY05216 Canola plasma membrane 49.54 42.46
CDY27726 Canola golgi, plasma membrane, vacuole 49.31 42.26
CDY18836 Canola plasma membrane 49.54 42.21
CDY47467 Canola plasma membrane 47.92 42.16
CDY49992 Canola golgi, plasma membrane, vacuole 49.31 41.93
CDX91766 Canola golgi, plasma membrane, vacuole 48.61 41.67
CDX87534 Canola plasma membrane 46.3 41.58
CDY26777 Canola plasma membrane 44.21 41.52
CDX74116 Canola plasma membrane 48.61 41.34
CDY66862 Canola plasma membrane 48.38 41.3
Zm00001d053846_P001 Maize plasma membrane 52.55 41.2
CDX88350 Canola plasma membrane 47.45 40.12
HORVU2Hr1G064160.1 Barley peroxisome 45.14 36.52
CDX91815 Canola plasma membrane 55.09 28.33
CDY62956 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078ERQ6EnsemblPlants:CDY02218ProteinID:CDY02218ProteinID:CDY02218.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00113633001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CS
TMHMM:TMhelixUniParc:UPI0004EE1047SEG:seg:::
Description
BnaA03g39490D
Coordinates
chrLK031932:+:760370..762594
Molecular Weight (calculated)
47245.4 Da
IEP (calculated)
5.401
GRAVY (calculated)
0.692
Length
432 amino acids
Sequence
(BLAST)
001: MGVGGGFFVA DSGHREEYEE GRVTSFVVIA CIVAAMGGLL FGYDIGISGG VTSMEEFLTR FFPDMLRQMQ NETGRETEYC KYDNELLTLF TSSLYLAALF
101: ASFLASSITR LFGRKVSMTI GGLAFLSGAL LNGFAISLEM LIIGRLLLGV GVGFVNQAVP LYLSEMAPAK IRGALNMAFQ LAITMGILAA NIYRPQLVFC
201: TFIPFFQQLT GINVIMFYAP VLFRTIGFGK DASLISAVIT GLVNVVSTLV SIYSVDKFGR RGLFLAGGIQ MIVTQVAVGS IIGWKFGVNG EGSLSPVDTQ
301: ILLALICLYV AGFAWSWGPL GWLVPSEICP LEIRSAGQSL NVSVNMFFTF LIGQFFVTML CHMKFGLFYF FAVLVLIMTI FIHFLLPETK GVPIEEMARV
401: WKDHSFWGKY ARVVDGGDND DGDDVYVFSV KA
Best Arabidopsis Sequence Match ( AT1G50310.1 )
(BLAST)
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
Arabidopsis Description
STP9STP9 [Source:UniProtKB/TrEMBL;Acc:A0A178WN25]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.