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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • peroxisome 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053846_P001 Maize plasma membrane 91.94 86.93
Os02t0160400-01 Rice plasma membrane 78.69 78.85
HORVU6Hr1G025520.1 Barley plasma membrane 78.12 77.82
TraesCS6D01G123300.1 Wheat plasma membrane 76.78 76.48
TraesCS6A01G134000.1 Wheat plasma membrane 76.58 76.29
TraesCS6B01G162200.1 Wheat plasma membrane 76.2 75.91
CDY62955 Canola extracellular, plasma membrane 23.8 59.62
GSMUA_Achr5P26540_001 Banana extracellular, plasma membrane, vacuole 49.14 57.14
CDY33433 Canola cytosol, peroxisome, plasma membrane 32.05 56.42
EER97830 Sorghum plasma membrane 55.85 55.96
EES13444 Sorghum plasma membrane 55.47 55.47
GSMUA_Achr11P... Banana plasma membrane 49.71 54.76
EER99540 Sorghum golgi, plasma membrane, vacuole 55.66 54.61
KRG90624 Soybean plasma membrane 53.36 54.4
EES03141 Sorghum golgi, plasma membrane, vacuole 52.78 54.03
KRH36130 Soybean plasma membrane 52.59 53.62
GSMUA_Achr11P... Banana golgi, plasma membrane, plastid, vacuole 44.72 52.95
AT3G19940.1 Thale cress plasma membrane 52.21 52.92
OQU85892 Sorghum plasma membrane 52.98 52.77
KRH40901 Soybean plasma membrane 51.63 52.54
KRH40905 Soybean plasma membrane 51.44 52.34
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 51.82 52.33
CDY53930 Canola golgi, plasma membrane, vacuole 51.63 52.13
CDY29325 Canola golgi, plasma membrane, vacuole 51.63 52.13
CDY02218 Canola plasma membrane 42.99 51.85
AT5G23270.1 Thale cress plasma membrane 51.06 51.75
AT3G19930.1 Thale cress plasma membrane 50.86 51.56
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 51.06 51.55
CDY42509 Canola golgi, plasma membrane, vacuole 51.06 51.55
CDY22788 Canola golgi, plasma membrane, vacuole 51.06 51.55
Bra001766.1-P Field mustard plasma membrane 50.48 51.17
Bra038242.1-P Field mustard plasma membrane 50.48 51.17
CDY33432 Canola plasma membrane 50.1 51.08
Bra038243.1-P Field mustard plasma membrane 50.1 51.08
Bra038245.1-P Field mustard plasma membrane 50.1 51.08
CDY33434 Canola plasma membrane 49.9 50.88
AT1G50310.1 Thale cress plasma membrane 50.48 50.87
CDY62951 Canola plasma membrane 42.23 50.57
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 48.94 50.49
CDY25359 Canola plasma membrane 41.46 50.35
CDY36072 Canola plasma membrane 41.46 50.35
GSMUA_Achr10P... Banana plasma membrane 48.56 50.3
CDX82272 Canola plasma membrane 41.27 50.12
CDY33431 Canola plasma membrane 41.27 50.12
CDY45759 Canola plasma membrane 50.1 50.0
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 48.56 50.0
Bra022468.1-P Field mustard plasma membrane 46.07 49.69
CDY38688 Canola plasma membrane 41.07 49.65
CDY62952 Canola golgi, plasma membrane, vacuole 49.71 49.24
CDY24593 Canola plasma membrane 41.46 49.09
EER93920 Sorghum golgi, plasma membrane, vacuole 49.9 48.78
CDY66084 Canola golgi, plasma membrane, vacuole 34.17 48.24
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 34.36 47.48
EER92634 Sorghum plasma membrane 45.49 45.84
EER96733 Sorghum mitochondrion, plasma membrane 45.3 45.56
EER89165 Sorghum cytosol, peroxisome, plasma membrane 45.49 45.49
EER98187 Sorghum plasma membrane 44.53 45.31
KXG40430 Sorghum plasma membrane 45.11 43.68
EES18290 Sorghum plasma membrane 39.16 42.5
OQU92134 Sorghum peroxisome, plasma membrane, vacuole 42.42 42.02
OQU89290 Sorghum golgi, peroxisome, plasma membrane 30.52 41.95
EES10921 Sorghum peroxisome, plasma membrane, vacuole 40.69 41.33
KXG28819 Sorghum golgi, plasma membrane, vacuole 41.46 41.22
CDY68476 Canola plasma membrane 8.64 40.91
CDY62956 Canola cytosol 3.07 39.02
KXG26442 Sorghum peroxisome 40.5 38.93
EES10920 Sorghum plasma membrane 38.77 38.77
OQU81689 Sorghum extracellular, plasma membrane, vacuole 37.24 38.04
EES10919 Sorghum peroxisome, plasma membrane, vacuole 36.28 36.99
EES11734 Sorghum plasma membrane 36.47 36.82
OQU85192 Sorghum peroxisome, plasma membrane, vacuole 34.36 36.68
KXG25760 Sorghum plasma membrane 35.89 36.59
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EntrezGene:8074669UniProt:C5XVE9EnsemblPlants:EES04558ProteinID:EES04558
ProteinID:EES04558.1GO:GO:0003674GO:GO:0005215GO:GO:0005351GO:GO:0005355GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0035428GO:GO:0046323GO:GO:0055085GO:GO:1902600GO:GO:1904659InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00217
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF178EnsemblPlantsGene:SORBI_3004G049300SUPFAM:SSF103473InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI0001A8555BRefSeq:XP_002451582.1SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:3980029..3982906
Molecular Weight (calculated)
57238.8 Da
IEP (calculated)
8.780
GRAVY (calculated)
0.575
Length
521 amino acids
Sequence
(BLAST)
001: MAGAVIVHHH TRYKTYPGEV TGIVFFSCLI ASFAGCIFGY DIGLTSGLTS SEPYMVKFFP SIYEEMKKQV VVNQYCKFDS QMLTLFCSSL FLSATVCAFF
101: AGPMTRSFGR KWTLFSAASA YVAGACIGGV SVNFPMLLTG RILVGAGVGI SIQAAPLYIS EMAPAQQRGM LNILFQLMIT IGILTANMTN YLGSKVPGGW
201: GWRIAVAFGA IPAAVIALGA LAIPDTPTSL IERGDTATAR KTLLQIRGVG DVREEFDDLS TASEDAKAVE CPWRELFFGG KYKPQLTFAL LIPFFQQLTG
301: INVIMFYAPV LFKTVGFKQN ATLVSSVITG LVNVFSTFVS TVTADKVGRR ALFLQGGTQM IISQILVGTF IGLQFGMSGT GDISEQYAMC IVLFVCVYVA
401: GFAWSWGPMG WLIPSEIYPL AVRNAAMSIT VAVNMFFTAF IGQIFLTLLC HLRFGLFYFF GAWVLLMTLF IAMLLPETKN VPIEEMAHVW KKHWFWRKFV
501: IDTSNDARSA EMRKRIALEM S
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.