CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027268_P001	Maize	plasma membrane	91.82	94.1
TraesCS4D01G365800.1	Wheat	plasma membrane	82.53	84.41
TraesCS5A01G542600.2	Wheat	plasma membrane	82.16	84.03
Os03t0101300-02	Rice	plasma membrane	79.18	82.08
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	73.05	74.71
TraesCS4B01G371700.2	Wheat	plasma membrane	82.53	72.2
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	60.41	63.98
KRH56314	Soybean	plasma membrane	59.29	63.67
PGSC0003DMT400048537	Potato	plasma membrane	58.36	61.69
KRH56317	Soybean	plasma membrane	58.18	61.37
Solyc03g093410.2.1	Tomato	plasma membrane	57.99	60.7
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	57.25	60.51
GSMUA_Achr7P06560_001	Banana	mitochondrion, plasma membrane	52.04	57.61
GSMUA_Achr1P06040_001	Banana	plasma membrane	50.74	57.35
KXG28819	Sorghum	golgi, plasma membrane, vacuole	55.2	56.68
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	54.09	55.85
OQU85892	Sorghum	plasma membrane	52.97	54.49
EER99540	Sorghum	golgi, plasma membrane, vacuole	53.72	54.43
EER97830	Sorghum	plasma membrane	52.6	54.42
EES03141	Sorghum	golgi, plasma membrane, vacuole	51.49	54.42
EES13444	Sorghum	plasma membrane	51.3	52.98
EER93920	Sorghum	golgi, plasma membrane, vacuole	51.3	51.78
EES18290	Sorghum	plasma membrane	45.91	51.46
EER96733	Sorghum	mitochondrion, plasma membrane	48.7	50.58
EER92634	Sorghum	plasma membrane	48.51	50.48
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	35.13	49.87
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	46.84	49.12
EES04558	Sorghum	plasma membrane	43.68	45.11
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	42.38	44.71
KXG26442	Sorghum	peroxisome	44.8	44.46
Solyc03g093400.2.1	Tomato	plasma membrane	56.88	43.59
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	39.41	43.44
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	40.89	43.05
EER98187	Sorghum	plasma membrane	40.33	42.38
EES10920	Sorghum	plasma membrane	40.52	41.84
EES11734	Sorghum	plasma membrane	39.03	40.7
KXG25760	Sorghum	plasma membrane	38.1	40.12
Os03t0101500-01	Rice	cytosol	0.56	1.16

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	UniProt:A0A1B6QR81	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0022891
GO:GO:0055085	InterPro:IPR020846	EnsemblPlants:KXG40430	ProteinID:KXG40430	ProteinID:KXG40430.1	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF18	EnsemblPlantsGene:SORBI_3001G543500	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0003C69772	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:80723392..80729118

Molecular Weight (calculated)

58537.0 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.496

Length

538 amino acids

Sequence
(BLAST)

001: MAIGGFVDAP AAAAGADYGG RVTSFVVLSC IVAGSGGILF GYDLGISGGV TSMESFLRKF FPDVYHQMKG DKDVSNYCRF DSELLTVFTS SLYVAGLVAT
101: LFASSVTRRF GRRTSILIGG TVFVLGSVFG GAAVNVYMLL LNRILLGIGL GFTNQSIPLY LSEMAPPQYR GAINNGFELC ISIGILIANL INYGVEKIAG
201: GWGWRLSLSL AAVPAAFLTV GAIFLPETPS FIIQRGGGGG DIDEARLLLQ RLRGTTRVQK ELDDLVSAAS EASRTTATRR PFRNILRSKY RPQLVIALLV
301: PFFNQVTGIN VINFYAPVMF RTIGLKESAS LMSAVVTRVC ATAANVVAMV VVDRFGRRKL LLVGGVQMIL SQVMVGAVLA AKFKDHGGMD KEYAYLVLVI
401: MCVFVAGFAW SWGPLTYLVP TEICPLEIRS AGQSIVIAVI FFVTFLIGQT FLAMLCHLKF GTFFLFGGWV CVMTLFVYFF LPETKQLPME QMEQVWRTHW
501: FWKRIADADA DAGEEEEQGQ RRPRPRGEAA GTIALSAT

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.