Factsheet for TraesCS4D01G365800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G542600.2	Wheat	plasma membrane	98.29	98.29
TraesCS4B01G371700.2	Wheat	plasma membrane	97.72	83.58
Zm00001d027268_P001	Maize	plasma membrane	82.7	82.86
KXG40430	Sorghum	plasma membrane	84.41	82.53
Os03t0101300-02	Rice	plasma membrane	79.09	80.15
TraesCS1D01G221100.1	Wheat	plasma membrane	76.43	77.16
KRH56314	Soybean	plasma membrane	60.08	63.07
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	60.84	62.99
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	60.08	62.08
Solyc03g093410.2.1	Tomato	plasma membrane	60.65	62.06
KRH56317	Soybean	plasma membrane	60.08	61.96
PGSC0003DMT400048537	Potato	plasma membrane	59.89	61.89
GSMUA_Achr7P06560_001	Banana	mitochondrion, plasma membrane	53.61	58.02
GSMUA_Achr1P06040_001	Banana	plasma membrane	51.9	57.35
TraesCS7D01G080200.1	Wheat	peroxisome, plasma membrane, vacuole	54.75	56.25
TraesCS7D01G286600.1	Wheat	plastid	53.8	55.38
TraesCS2D01G264200.1	Wheat	plasma membrane	53.8	54.74
TraesCS3D01G470200.1	Wheat	plasma membrane	53.42	54.67
TraesCS5D01G001600.1	Wheat	golgi, plasma membrane, vacuole	52.09	53.0
TraesCS3D01G470300.1	Wheat	plasma membrane	51.14	52.95
TraesCS3D01G105000.1	Wheat	golgi, plasma membrane, vacuole	50.38	51.76
TraesCS4D01G243100.1	Wheat	plasma membrane	49.05	50.19
TraesCS5D01G233900.1	Wheat	plasma membrane	49.05	49.62
TraesCS2D01G319100.1	Wheat	peroxisome, plasma membrane, vacuole	46.96	48.15
TraesCS5D01G187100.1	Wheat	plasma membrane	47.91	47.64
TraesCS5D01G549900.1	Wheat	plasma membrane	46.39	47.47
TraesCS5D01G558100.1	Wheat	plasma membrane	44.87	46.83
TraesCS2D01G318200.1	Wheat	peroxisome, plasma membrane, vacuole	45.25	46.67
TraesCS5D01G234100.1	Wheat	plasma membrane	45.44	45.96
TraesCS5D01G234200.1	Wheat	plasma membrane	45.44	45.27
TraesCS2D01G318500.1	Wheat	vacuole	43.35	44.97
TraesCS2D01G318300.1	Wheat	plasma membrane	43.35	44.36
TraesCS6D01G123300.1	Wheat	plasma membrane	43.92	44.17
TraesCS2D01G318400.1	Wheat	plasma membrane	42.97	43.88
Solyc03g093400.2.1	Tomato	plasma membrane	58.56	43.87
TraesCS1D01G343200.1	Wheat	plasma membrane	42.59	43.84
TraesCS4D01G341400.1	Wheat	plasma membrane	42.78	43.69
Os03t0101500-01	Rice	cytosol	0.95	1.93

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF18	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G365800	EnsemblPlants:TraesCS4D01G365800.1	TIGR:cd06174

Description

No Description!

Coordinates

chr4D:+:509663214..509667590

Molecular Weight (calculated)

57245.9 Da

IEP (calculated)

9.101

GRAVY (calculated)

0.563

Length

526 amino acids

Sequence
(BLAST)

001: MAIGAFVEGP AGGAGYSGRV TSFVVLSCIV AGSGGILFGY DLGISGGVTS MESFLKKFFP DVYHQMKGDK AATVSNYCRF DSELLTVFTS SLYVAGLVAT
101: LFASSVTTRY GRRASILIGG SVFIAGSAFG GAAVNVYMLL VNRILLGIGL GFTNQSIPLY LSEMAPPQYR GAINNGFELC ISIGILIANV INYGVQKIEG
201: GWGWRISLSM AAVPAAFLTI GAIFLPETPS FLIQRDGNVD EAKMMLQRLR GTTGVQKELD DLVTASNISR AIKNPYRNIL KKKYRPQLVI ALLIPFFNQV
301: TGINVINFYA PVMFRTIGLG ESAALMSAVV TRLCATVANI VAMIVVDKFG RRKLLLVGGI QMILSQFTVG AILAVKFKDH GVMDKEYGYL VLVIMCVFVA
401: GFAWSWGPLT YLVPTEICPL EIRSAGQSVV IAVIFLMTFV IGQTFLNMLC HLKFGTFFLF GGWVCVMTLF VFFFLPETKQ LPMEQMEQVW RKHWFWKRIV
501: GEGEEEVDQA HTGAGAIAMS TAPHSS

Best Arabidopsis Sequence Match ( AT5G61520.1 )
(BLAST)

001: MVAEEARKEA MAKSVSGGKI TYFVVASCVM AAMGGVIFGY DIGVSGGVMS MGPFLKRFFP KVYKLQEEDR RRRGNSNNHY CLFNSQLLTS FTSSLYVSGL
101: IATLLASSVT RSWGRKPSIF LGGVSFLAGA ALGGSAQNVA MLIIARLLLG VGVGFANQSV PLYLSEMAPA KYRGAISNGF QLCIGIGFLS ANVINYETQN
201: IKHGWRISLA TAAIPASILT LGSLFLPETP NSIIQTTGDV HKTELMLRRV RGTNDVQDEL TDLVEASSGS DTDSNAFLKL LQRKYRPELV MALVIPFFQQ
301: VTGINVVAFY APVLYRTVGF GESGSLMSTL VTGIVGTSST LLSMLVVDRI GRKTLFLIGG LQMLVSQVTI GVIVMVADVH DGVIKEGYGY AVVVLVCVYV
401: AGFGWSWGPL GWLVPSEIFP LEIRSVAQSV TVAVSFVFTF AVAQSAPPML CKFRAGIFFF YGGWLVVMTV AVQLFLPETK NVPIEKVVGL WEKHWFWRRM
501: TSKRDIQETT ILSH

Arabidopsis Description

STP3AT5G61520 protein [Source:UniProtKB/TrEMBL;Acc:B9DGV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.