Factsheet for TraesCS2D01G319100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	peroxisome, plasma membrane, vacuole
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G341400.1	Wheat	peroxisome, plasma membrane, vacuole	98.25	98.25
TraesCS2B01G339100.1	Wheat	peroxisome, plasma membrane, vacuole	97.86	97.86
Zm00001d025572_P001	Maize	peroxisome, plasma membrane, vacuole	86.16	87.18
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	85.38	85.38
HORVU2Hr1G079790.7	Barley	golgi	85.38	85.05
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	68.81	69.35
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	66.08	67.8
TraesCS2D01G318200.1	Wheat	peroxisome, plasma membrane, vacuole	66.28	66.67
TraesCS4D01G341400.1	Wheat	plasma membrane	63.35	63.11
TraesCS2D01G318500.1	Wheat	vacuole	62.18	62.92
TraesCS2D01G318300.1	Wheat	plasma membrane	61.99	61.87
VIT_18s0001g05570.t01	Wine grape	plasma membrane	58.48	60.0
KRH62357	Soybean	plasma membrane	57.12	57.79
KRH16713	Soybean	plasma membrane	56.53	57.09
KRH53073	Soybean	plasma membrane	56.34	56.78
KRH62356	Soybean	plasma membrane	56.34	56.78
KRH62355	Soybean	plasma membrane	55.75	56.3
TraesCS2D01G318400.1	Wheat	plasma membrane	56.34	56.12
PGSC0003DMT400016373	Potato	plasma membrane	56.14	56.03
KRH18902	Soybean	plasma membrane	54.78	55.98
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	55.17	55.93
KRH16714	Soybean	plasma membrane	55.17	55.82
CDY66862	Canola	plasma membrane	54.19	54.94
CDX91766	Canola	golgi, plasma membrane, vacuole	53.8	54.76
Solyc04g074070.1.1	Tomato	plasma membrane	54.19	54.62
TraesCS5D01G233900.1	Wheat	plasma membrane	53.02	52.31
TraesCS3D01G470200.1	Wheat	plasma membrane	51.85	51.75
TraesCS5D01G549900.1	Wheat	plasma membrane	50.88	50.78
TraesCS2D01G264200.1	Wheat	plasma membrane	51.07	50.68
TraesCS5D01G001600.1	Wheat	golgi, plasma membrane, vacuole	50.68	50.29
TraesCS3D01G470300.1	Wheat	plasma membrane	49.71	50.2
TraesCS5D01G234100.1	Wheat	plasma membrane	50.88	50.19
TraesCS7D01G286600.1	Wheat	plastid	49.9	50.1
TraesCS5D01G234200.1	Wheat	plasma membrane	51.07	49.62
TraesCS5D01G558100.1	Wheat	plasma membrane	48.73	49.6
TraesCS4D01G243100.1	Wheat	plasma membrane	49.32	49.22
Bra036755.1-P	Field mustard	plasma membrane	53.61	48.76
TraesCS7D01G080200.1	Wheat	peroxisome, plasma membrane, vacuole	48.15	48.24
TraesCS4D01G365800.1	Wheat	plasma membrane	48.15	46.96
TraesCS5D01G187100.1	Wheat	plasma membrane	48.34	46.88
TraesCS1D01G221100.1	Wheat	plasma membrane	47.56	46.83
TraesCS1D01G343200.1	Wheat	plasma membrane	46.59	46.77
TraesCS3D01G105000.1	Wheat	golgi, plasma membrane, vacuole	45.81	45.9
TraesCS6D01G123300.1	Wheat	plasma membrane	42.69	41.87

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF44	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G319100	EnsemblPlants:TraesCS2D01G319100.1	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:409578346..409582565

Molecular Weight (calculated)

54230.6 Da

IEP (calculated)

9.994

GRAVY (calculated)

0.643

Length

513 amino acids

Sequence
(BLAST)

001: MAGGGFAVAD APSGDYGGGI TFSVVVTCLM AASGGLIFGY DIGISGGVTA MESFLEEFFP GVLRRMAAAR RDQYCVYDSH VLTAFTSSLY LAGLVASLAA
101: GRVTRAVGRQ AVMLAGGAFF FAGAAVNAAA VNIAMLIVGR MLLGFGIGFT NQAAPVYLAE TAPAKWRGAF TTGFQLFLGI GNLAANLTNY GAARIPRWGW
201: RLSLGLAAVP AAVIFVGALL IPDTPSSLIV RGRVEQARAA LRRVRGPKAD VDAELEDVAR AVGVARSNEQ GAFRRILGRE YRPHLVMAVA VPLFQQLTGV
301: IVIAFFSPVL FQTAGFGSNA ALMGAVILGA VNLGSALVSV ATVDRYGRRP LFLAGGLVMI MCQVAVAWIM GSQIGRDGEF AMARKYSVAV LALTCVFSAS
401: FGWSWGPLTW VIPGEIFPVE VRSAGQGISV AVNLGATFVL TQTFLSMLCS FKYATFIYYA AWVAVMTAFV VAFLPETKGV PLEAMGAVWA RHWYWGRFVK
501: VQQPAKNTDA LIN

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.