Factsheet for TraesCS1D01G221100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G219500.1	Wheat	plasma membrane	94.63	96.67
TraesCS1B01G232900.1	Wheat	plasma membrane	95.78	95.78
HORVU1Hr1G056010.7	Barley	peroxisome, plasma membrane, vacuole	94.05	92.8
Os10t0561300-01	Rice	plasma membrane	84.84	85.33
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	82.53	81.75
Zm00001d000183_P001	Maize	peroxisome, plasma membrane, vacuole	79.27	79.42
TraesCS4D01G365800.1	Wheat	plasma membrane	77.16	76.43
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	60.27	61.81
KRH56314	Soybean	plasma membrane	58.35	60.68
Solyc03g093410.2.1	Tomato	plasma membrane	59.12	59.92
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	58.35	59.73
KRH56317	Soybean	plasma membrane	57.01	58.24
PGSC0003DMT400048537	Potato	plasma membrane	56.05	57.37
GSMUA_Achr7P06560_001	Banana	mitochondrion, plasma membrane	52.02	55.76
GSMUA_Achr1P06040_001	Banana	plasma membrane	50.86	55.67
TraesCS7D01G080200.1	Wheat	peroxisome, plasma membrane, vacuole	54.32	55.27
TraesCS7D01G286600.1	Wheat	plastid	53.55	54.6
TraesCS3D01G470200.1	Wheat	plasma membrane	53.36	54.09
TraesCS3D01G470300.1	Wheat	plasma membrane	52.59	53.94
TraesCS2D01G264200.1	Wheat	plasma membrane	52.98	53.38
TraesCS5D01G001600.1	Wheat	golgi, plasma membrane, vacuole	51.06	51.45
TraesCS3D01G105000.1	Wheat	golgi, plasma membrane, vacuole	50.48	51.37
TraesCS5D01G233900.1	Wheat	plasma membrane	48.37	48.46
TraesCS2D01G319100.1	Wheat	peroxisome, plasma membrane, vacuole	46.83	47.56
TraesCS4D01G243100.1	Wheat	plasma membrane	46.45	47.08
TraesCS5D01G549900.1	Wheat	plasma membrane	45.68	46.3
TraesCS2D01G318200.1	Wheat	peroxisome, plasma membrane, vacuole	45.11	46.08
TraesCS5D01G558100.1	Wheat	plasma membrane	44.15	45.63
TraesCS5D01G234100.1	Wheat	plasma membrane	45.49	45.58
TraesCS5D01G187100.1	Wheat	plasma membrane	46.26	45.56
TraesCS4D01G341400.1	Wheat	plasma membrane	44.15	44.66
TraesCS5D01G234200.1	Wheat	plasma membrane	45.11	44.51
TraesCS2D01G318400.1	Wheat	plasma membrane	43.57	44.08
TraesCS2D01G318300.1	Wheat	plasma membrane	43.19	43.77
TraesCS2D01G318500.1	Wheat	vacuole	42.03	43.2
TraesCS6D01G123300.1	Wheat	plasma membrane	43.19	43.02
TraesCS1D01G343200.1	Wheat	plasma membrane	42.03	42.86
Solyc03g093400.2.1	Tomato	plasma membrane	55.47	41.17

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF334	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G221100	EnsemblPlants:TraesCS1D01G221100.1	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:308586212..308588657

Molecular Weight (calculated)

57260.8 Da

IEP (calculated)

9.162

GRAVY (calculated)

0.496

Length

521 amino acids

Sequence
(BLAST)

001: MAIGAFVDAP AGCSGGYSGR VTPFVVLTCI VAGSGGILFG YDLGISGGVT SMDSFLKTFF PEVYRHKQDS NVSNYCQFDS ELLTVFTSSL YIAGLIATLF
101: ASFVTRRFGR RASMLIGGTV FIAGSAFGGA AVNVPMLLLN RILLGIGLGF TNQSIPLYLS EMAPPQYRGA INNGFELSIS IGILIANILN YCVVKLAAGW
201: GWRISLSMAA VPATFLTIGA IFLPETPSFI IQRDGDTDKA RALLQKLRGT TSVQNELDDL VSASNLSRAA RYPFRKIFKR KYRPQLAMVL LIPFFNQLTG
301: INVMNFYAPV MFRTIGLKES ASLLSSVVTR LCATFANIIA MLVVDRFGRR KLFLVGGIQM ILSQLAVGAI LAAEFKDNGL MDKDYAFLVL ITMCVFVAGF
401: AWSWGPLTFL VPTEICPLEI RSAGQSIVVA VVFLMTFVIG QTFLAVLCRI KSGTFFLFAA WICVMTLVVY LFLPETKKLP MEQMEQVWRG HWFWKKIVGE
501: EGDKEEEEKE RQEKKIDSPS S

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.