Factsheet for TraesCS6D01G123300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
peroxisome 1
endoplasmic reticulum 1
plasma membrane 3
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G162200.1	Wheat	plasma membrane	98.85	98.85
TraesCS6A01G134000.1	Wheat	plasma membrane	98.47	98.47
HORVU6Hr1G025520.1	Barley	plasma membrane	95.79	95.79
Os02t0160400-01	Rice	plasma membrane	82.03	82.5
EES04558	Sorghum	plasma membrane	76.48	76.78
Zm00001d053846_P001	Maize	plasma membrane	76.29	72.41
TraesCS7D01G286600.1	Wheat	plastid	57.36	58.71
CDY62955	Canola	extracellular, plasma membrane	22.56	56.73
GSMUA_Achr5P26540_001	Banana	extracellular, plasma membrane, vacuole	48.57	56.7
TraesCS2D01G264200.1	Wheat	plasma membrane	54.68	55.32
GSMUA_Achr11P...	Banana	plasma membrane	49.71	54.97
CDY33433	Canola	cytosol, peroxisome, plasma membrane	30.78	54.39
KRG90624	Soybean	plasma membrane	52.96	54.21
GSMUA_Achr11P...	Banana	golgi, plasma membrane, plastid, vacuole	45.32	53.86
TraesCS5D01G001600.1	Wheat	golgi, plasma membrane, vacuole	52.96	53.58
TraesCS3D01G470200.1	Wheat	plasma membrane	52.58	53.5
AT3G19940.1	Thale cress	plasma membrane	52.39	53.31
CDY22788	Canola	golgi, plasma membrane, vacuole	52.39	53.1
Bra018841.1-P	Field mustard	golgi, plasma membrane, vacuole	52.39	53.1
CDY42509	Canola	golgi, plasma membrane, vacuole	52.39	53.1
TraesCS3D01G470300.1	Wheat	plasma membrane	51.43	52.95
Bra039642.1-P	Field mustard	golgi, plasma membrane, vacuole	52.2	52.91
CDY53930	Canola	golgi, plasma membrane, vacuole	52.2	52.91
AT5G23270.1	Thale cress	plasma membrane	51.82	52.72
CDY29325	Canola	golgi, plasma membrane, vacuole	52.01	52.71
KRH36130	Soybean	plasma membrane	51.43	52.64
AT1G50310.1	Thale cress	plasma membrane	52.01	52.61
KRH40901	Soybean	plasma membrane	51.24	52.34
CDY02218	Canola	plasma membrane	43.21	52.31
KRH40905	Soybean	plasma membrane	51.05	52.15
Bra038245.1-P	Field mustard	plasma membrane	50.67	51.86
Bra038243.1-P	Field mustard	plasma membrane	50.67	51.86
CDY33432	Canola	plasma membrane	50.67	51.86
CDY33434	Canola	plasma membrane	50.48	51.66
CDY45759	Canola	plasma membrane	51.43	51.53
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	49.71	51.49
Bra013029.1-P	Field mustard	golgi, plasma membrane, vacuole	37.09	51.46
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	49.71	51.38
CDY66084	Canola	golgi, plasma membrane, vacuole	36.14	51.22
CDY62952	Canola	golgi, plasma membrane, vacuole	50.48	50.19
Bra001766.1-P	Field mustard	plasma membrane	48.37	49.22
AT3G19930.1	Thale cress	plasma membrane	48.37	49.22
CDY36072	Canola	plasma membrane	40.34	49.18
CDY62951	Canola	plasma membrane	40.73	48.97
CDX82272	Canola	plasma membrane	40.15	48.95
Bra038242.1-P	Field mustard	plasma membrane	47.99	48.83
CDY25359	Canola	plasma membrane	39.96	48.72
CDY33431	Canola	plasma membrane	39.96	48.72
GSMUA_Achr10P...	Banana	plasma membrane	46.65	48.51
CDY38688	Canola	plasma membrane	39.77	48.26
CDY24593	Canola	plasma membrane	39.96	47.5
Bra022468.1-P	Field mustard	plasma membrane	43.79	47.41
TraesCS1D01G343200.1	Wheat	plasma membrane	45.32	46.38
TraesCS4D01G243100.1	Wheat	plasma membrane	44.93	45.72
CDY68476	Canola	plasma membrane	9.56	45.45
TraesCS5D01G233900.1	Wheat	plasma membrane	44.93	45.19
TraesCS7D01G080200.1	Wheat	peroxisome, plasma membrane, vacuole	43.98	44.92
TraesCS4D01G365800.1	Wheat	plasma membrane	44.17	43.92
CDY62956	Canola	cytosol	3.44	43.9
TraesCS1D01G221100.1	Wheat	plasma membrane	43.02	43.19
TraesCS2D01G319100.1	Wheat	peroxisome, plasma membrane, vacuole	41.87	42.69
TraesCS5D01G549900.1	Wheat	plasma membrane	41.87	42.61
TraesCS5D01G558100.1	Wheat	plasma membrane	40.54	42.06
TraesCS5D01G187100.1	Wheat	plasma membrane	41.87	41.4
TraesCS5D01G234100.1	Wheat	plasma membrane	41.11	41.35
TraesCS5D01G234200.1	Wheat	plasma membrane	41.49	41.1
TraesCS3D01G105000.1	Wheat	golgi, plasma membrane, vacuole	40.15	41.02
TraesCS2D01G318200.1	Wheat	peroxisome, plasma membrane, vacuole	39.58	40.59
TraesCS2D01G318300.1	Wheat	plasma membrane	39.39	40.08
TraesCS2D01G318500.1	Wheat	vacuole	38.62	39.84
TraesCS2D01G318400.1	Wheat	plasma membrane	37.67	38.25
TraesCS4D01G341400.1	Wheat	plasma membrane	36.71	37.28

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF178	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G123300	EnsemblPlants:TraesCS6D01G123300.1	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:88502597..88504281

Molecular Weight (calculated)

57268.5 Da

IEP (calculated)

8.191

GRAVY (calculated)

0.589

Length

523 amino acids

Sequence
(BLAST)

001: MAGAVIVHHH NRYKTYPGDV TGFVFYSCLV ASVGGCIFGY DIGMAASLTS TESFLLLFFP DIYQQQKDQV ITNQYCKFDS QELSLFGSSL FLSAATASLF
101: ASPMARAFGR KWTLFYAAVA YVIGACMGGI ATTFAMLITG RLLLGVGVGL CIHASPLYLS EMAPAQQRGM LNILFQLMIT IGILSASLTN YWTSRFLGGW
201: GWRVGLGMGA VPGSVIALGS LAIPDTPISL LSRGETELAR ATLSQIRGIG PDDVRQEFDD LAAACEESKA VANPWWELLF TGKYKPQLTF ALGVPFFQQL
301: TGINVIMFYA PVLFKTVGFR NDASLMSSVI TGLVNVFSTF VAVVTADKVG RRALFLQGGT QMIISQILVG TFIGLQFGLS GTGAISEQYA MCIVLFVCVY
401: VAGFAWSWGP MGWLIPSEVY PLAVRSQAQS ITVAVNMCFT AFIGQVFLTL LCHLRFGLFY FFGAWLLLMT IFIAVLLPET KCVPLEEVSH VFRKHWFWRK
501: YVVDTSAEAR GAEMRKRIAL EMS

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.