Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G243500.1 | Wheat | plasma membrane | 99.81 | 99.81 |
| TraesCS4A01G066200.1 | Wheat | plasma membrane | 99.22 | 99.03 |
| Zm00001d028230_P001 | Maize | plasma membrane | 92.41 | 92.41 |
| EER92634 | Sorghum | plasma membrane | 92.41 | 91.88 |
| Os03t0218400-01 | Rice | plasma membrane | 91.05 | 90.87 |
| GSMUA_Achr4P03620_001 | Banana | plasma membrane | 80.16 | 84.6 |
| GSMUA_Achr7P27070_001 | Banana | plasma membrane | 78.4 | 83.96 |
| AT5G26340.1 | Thale cress | plasma membrane | 82.68 | 80.8 |
| KRH77866 | Soybean | peroxisome, plasma membrane, vacuole | 81.91 | 80.65 |
| KRH27626 | Soybean | peroxisome, plasma membrane, vacuole | 81.52 | 80.27 |
| PGSC0003DMT400081426 | Potato | mitochondrion | 80.54 | 79.16 |
| Bra036575.1-P | Field mustard | peroxisome, plasma membrane, vacuole | 81.71 | 78.95 |
| CDX87052 | Canola | peroxisome, plasma membrane, vacuole | 81.71 | 78.95 |
| CDY19773 | Canola | plasma membrane | 81.71 | 78.95 |
| Solyc09g075820.2.1 | Tomato | nucleus | 80.16 | 78.78 |
| CDY67102 | Canola | cytosol, plasma membrane, vacuole | 76.26 | 77.93 |
| CDX80558 | Canola | plasma membrane | 75.68 | 76.73 |
| VIT_05s0020g03140.t01 | Wine grape | plasma membrane | 79.38 | 76.12 |
| KRH35542 | Soybean | plasma membrane | 69.46 | 75.16 |
| KRG91268 | Soybean | plasma membrane | 73.15 | 73.44 |
| KRH35541 | Soybean | peroxisome, plasma membrane, vacuole | 71.4 | 73.4 |
| TraesCS1D01G343200.1 | Wheat | plasma membrane | 59.34 | 59.69 |
| TraesCS2D01G264200.1 | Wheat | plasma membrane | 58.56 | 58.22 |
| TraesCS5D01G233900.1 | Wheat | plasma membrane | 58.37 | 57.69 |
| TraesCS3D01G470200.1 | Wheat | plasma membrane | 57.0 | 57.0 |
| TraesCS3D01G470300.1 | Wheat | plasma membrane | 55.64 | 56.3 |
| TraesCS7D01G286600.1 | Wheat | plastid | 55.06 | 55.38 |
| TraesCS5D01G234100.1 | Wheat | plasma membrane | 54.86 | 54.23 |
| TraesCS5D01G001600.1 | Wheat | golgi, plasma membrane, vacuole | 54.47 | 54.16 |
| TraesCS5D01G549900.1 | Wheat | plasma membrane | 54.09 | 54.09 |
| TraesCS5D01G558100.1 | Wheat | plasma membrane | 52.33 | 53.37 |
| TraesCS5D01G234200.1 | Wheat | plasma membrane | 54.28 | 52.84 |
| TraesCS5D01G187100.1 | Wheat | plasma membrane | 53.89 | 52.36 |
| TraesCS7D01G080200.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.0 | 50.2 |
| TraesCS2D01G319100.1 | Wheat | peroxisome, plasma membrane, vacuole | 49.22 | 49.32 |
| TraesCS4D01G365800.1 | Wheat | plasma membrane | 50.19 | 49.05 |
| TraesCS3D01G105000.1 | Wheat | golgi, plasma membrane, vacuole | 47.47 | 47.66 |
| TraesCS2D01G318200.1 | Wheat | peroxisome, plasma membrane, vacuole | 46.89 | 47.25 |
| TraesCS1D01G221100.1 | Wheat | plasma membrane | 47.08 | 46.45 |
| TraesCS2D01G318300.1 | Wheat | plasma membrane | 44.94 | 44.94 |
| TraesCS6D01G123300.1 | Wheat | plasma membrane | 45.72 | 44.93 |
| TraesCS2D01G318500.1 | Wheat | vacuole | 44.16 | 44.77 |
| TraesCS4D01G341400.1 | Wheat | plasma membrane | 44.75 | 44.66 |
| TraesCS2D01G318400.1 | Wheat | plasma membrane | 43.58 | 43.5 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.6 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 |
| PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF70 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TIGRFAMs:TIGR00879 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G243100 | EnsemblPlants:TraesCS4D01G243100.1 | TIGR:cd06174 | SEG:seg |
Description
No Description!
Coordinates
chr4D:+:405770870..405775112
Molecular Weight (calculated)
56703.8 Da
IEP (calculated)
8.951
GRAVY (calculated)
0.486
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGGFAVSA PSGVEFEAKI TPIVIISCIM AATGGLMFGY DVGISGGVTS MDDFLREFFP AVLRRKNQDK ESNYCKYDNQ GLQLFTSSLY LAGLTATFFA
101: SYTTRRLGRR LTMLIAGVFF IIGVIFNGAA QNLAMLIIGR ILLGCGVGFA NQAVPLFLSE IAPTRIRGGL NILFQLNVTI GILFANLVNY GTSKIHPWGW
201: RLSLSLAGIP AAMLTLGALF VTDTPNSLIE RGHLEEGKAV LKRIRGTDNV EPEFNEIVEA SRIAQEVKHP FRNLLQRRNR PQLVIAVLLQ IFQQFTGINA
301: IMFYAPVLFN TLGFKSDASL YSAVITGAVN VLATLVSVYA VDRAGRRALL LEAGVQMFLS QVVIAVVLGI KVTDKSDNLG HGWAILVVVM VCTYVASFAW
401: SWGPLGWLIP SETFPLETRS AGQSVTVCVN LLFTFLIAQA FLSMLCHLKF AIFIFFSAWV LVMSVFVLFF LPETKNVPIE EMTDKVWKQH WFWKRFMDDD
501: DHHHNIANGK NATV
101: SYTTRRLGRR LTMLIAGVFF IIGVIFNGAA QNLAMLIIGR ILLGCGVGFA NQAVPLFLSE IAPTRIRGGL NILFQLNVTI GILFANLVNY GTSKIHPWGW
201: RLSLSLAGIP AAMLTLGALF VTDTPNSLIE RGHLEEGKAV LKRIRGTDNV EPEFNEIVEA SRIAQEVKHP FRNLLQRRNR PQLVIAVLLQ IFQQFTGINA
301: IMFYAPVLFN TLGFKSDASL YSAVITGAVN VLATLVSVYA VDRAGRRALL LEAGVQMFLS QVVIAVVLGI KVTDKSDNLG HGWAILVVVM VCTYVASFAW
401: SWGPLGWLIP SETFPLETRS AGQSVTVCVN LLFTFLIAQA FLSMLCHLKF AIFIFFSAWV LVMSVFVLFF LPETKNVPIE EMTDKVWKQH WFWKRFMDDD
501: DHHHNIANGK NATV
001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL
Arabidopsis Description
STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.