Factsheet for TraesCS3D01G105000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
golgi 1
mitochondrion 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, plasma membrane, vacuole
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G102800.1	Wheat	golgi, mitochondrion, plasma membrane, vacuole	96.09	96.47
TraesCS3B01G120300.1	Wheat	plasma membrane	86.52	96.1
HORVU3Hr1G018700.2	Barley	golgi, mitochondrion, plasma membrane, vacuole	94.53	94.53
HORVU3Hr1G018740.2	Barley	golgi, mitochondrion, plasma membrane, vacuole	94.53	94.16
Zm00001d032906_P001	Maize	plasma membrane	72.46	73.03
Os11t0594000-01	Rice	cytosol, mitochondrion, plasma membrane, vacuole	74.41	72.99
KXG28819	Sorghum	golgi, plasma membrane, vacuole	74.02	72.33
TraesCS7D01G080200.1	Wheat	peroxisome, plasma membrane, vacuole	68.55	68.55
GSMUA_Achr6P36920_001	Banana	plasma membrane	52.73	58.57
CDY23062	Canola	golgi, plasma membrane, vacuole	44.73	53.63
CDY02138	Canola	golgi, plasma membrane, vacuole	44.73	53.63
Bra012948.1-P	Field mustard	plasma membrane	52.93	53.35
AT5G61520.1	Thale cress	plasma membrane	51.37	51.17
TraesCS1D01G221100.1	Wheat	plasma membrane	51.37	50.48
TraesCS4D01G365800.1	Wheat	plasma membrane	51.76	50.38
TraesCS7D01G286600.1	Wheat	plastid	50.2	50.29
TraesCS5D01G001600.1	Wheat	golgi, plasma membrane, vacuole	50.2	49.71
TraesCS3D01G470200.1	Wheat	plasma membrane	49.22	49.03
TraesCS2D01G264200.1	Wheat	plasma membrane	49.41	48.94
TraesCS5D01G233900.1	Wheat	plasma membrane	49.61	48.85
TraesCS5D01G549900.1	Wheat	plasma membrane	48.63	48.44
TraesCS3D01G470300.1	Wheat	plasma membrane	47.85	48.23
TraesCS5D01G234100.1	Wheat	plasma membrane	48.44	47.69
TraesCS4D01G243100.1	Wheat	plasma membrane	47.66	47.47
TraesCS5D01G558100.1	Wheat	plasma membrane	45.9	46.63
TraesCS5D01G234200.1	Wheat	plasma membrane	47.46	46.02
TraesCS5D01G187100.1	Wheat	plasma membrane	47.46	45.94
TraesCS2D01G319100.1	Wheat	peroxisome, plasma membrane, vacuole	45.9	45.81
TraesCS2D01G318200.1	Wheat	peroxisome, plasma membrane, vacuole	45.12	45.29
TraesCS4D01G341400.1	Wheat	plasma membrane	45.31	45.05
TraesCS1D01G343200.1	Wheat	plasma membrane	44.73	44.81
TraesCS2D01G318300.1	Wheat	plasma membrane	43.75	43.58
TraesCS2D01G318500.1	Wheat	vacuole	42.97	43.39
TraesCS2D01G318400.1	Wheat	plasma membrane	42.19	41.94
TraesCS6D01G123300.1	Wheat	plasma membrane	41.02	40.15

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF127	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G105000	EnsemblPlants:TraesCS3D01G105000.1	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:57234005..57236052

Molecular Weight (calculated)

54798.3 Da

IEP (calculated)

9.326

GRAVY (calculated)

0.536

Length

512 amino acids

Sequence
(BLAST)

001: MAVGFAGSGG GEDQQRYGGR VTAFAALSCI TAAMGGAIFG YDIGTAGGVS SMEPFLRDFF PDVHRRMQAG AGVGNYCKFD SQLLTLFTSS LYVSGLLTAV
101: LVASWFTERH GRRPSMILGG VAYLGGAAVS GGAVNVYMAI LGRALLGVGL GFANQAVPLY LSEMAPARYR GAFSNGFQFS LCLGALAATV VNYGAEKIKA
201: GWGWRLSLGL AGVPAVLLTV GAIFLPETPN SLVQQGKGRG EVKALLQKIR GVDAVDEELD DIVAANATGQ AGDNGLRLIL SQRRYRPQLA MAVLIPSFTQ
301: LTGINAIGFY APVLLRTIGM SESAALLSTI VMVIISSAST FASMLLVDRF GRRTLLVLGG VQMFLSEVLI GGIMAAKLRD EGQVSRAYAV VLIFLIAIYS
401: TGFGWSWGPL SWLIPSEIFP LEVRSAGQSI TVASGFVFTI LVAQYFLAML CRLKAWLFFF FAGWILVMTA FAYLFLPETK GIPIEQIGNL WGRHWYWKRV
501: VGVEEVDDGQ KL

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.