Factsheet for TraesCS4B01G371700.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G365800.1	Wheat	plasma membrane	83.58	97.72
TraesCS5A01G542600.2	Wheat	plasma membrane	83.25	97.34
Zm00001d027268_P001	Maize	plasma membrane	70.73	82.86
KXG40430	Sorghum	plasma membrane	72.2	82.53
Os03t0101300-02	Rice	plasma membrane	67.32	79.77
TraesCS1B01G232900.1	Wheat	plasma membrane	64.72	76.39
KRH56314	Soybean	plasma membrane	50.89	62.48
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	51.22	62.01
KRH56317	Soybean	plasma membrane	51.06	61.57
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	50.89	61.49
Solyc03g093410.2.1	Tomato	plasma membrane	51.38	61.48
PGSC0003DMT400048537	Potato	plasma membrane	50.73	61.3
GSMUA_Achr7P06560_001	Banana	mitochondrion, plasma membrane	45.69	57.82
GSMUA_Achr1P06040_001	Banana	plasma membrane	43.9	56.72
TraesCS7B01G185800.1	Wheat	plastid	46.18	55.58
TraesCS2B01G232900.1	Wheat	plasma membrane	46.5	54.37
TraesCS2B01G282400.1	Wheat	plasma membrane	45.69	54.35
TraesCS3B01G518900.1	Wheat	plasma membrane	45.37	54.28
TraesCS3B01G518800.1	Wheat	plasma membrane	44.06	53.35
TraesCS5B01G001000.1	Wheat	golgi, plasma membrane, vacuole	44.23	52.61
TraesCS1B01G454800.1	Wheat	golgi, plasma membrane, vacuole	42.93	52.38
TraesCS3B01G120300.1	Wheat	plasma membrane	38.05	50.76
TraesCS4B01G243500.1	Wheat	plasma membrane	42.11	50.39
TraesCS5B01G225100.1	Wheat	plasma membrane	41.46	49.04
TraesCS2B01G339100.1	Wheat	peroxisome, plasma membrane, vacuole	40.0	47.95
TraesCS5B01G180800.1	Wheat	plasma membrane	40.81	47.54
TraesCS2B01G338400.1	Wheat	peroxisome, plasma membrane, vacuole	38.7	46.67
TraesCS6B01G384700.1	Wheat	plasma membrane	39.67	46.48
TraesCS5B01G225300.1	Wheat	plasma membrane	37.56	45.03
TraesCS4B01G346400.1	Wheat	plasma membrane	37.4	44.49
TraesCS2B01G338500.1	Wheat	plasma membrane	37.07	44.36
TraesCS5B01G225400.1	Wheat	plasma membrane	38.05	44.32
TraesCS1B01G353800.1	Wheat	plasma membrane	36.75	44.23
TraesCS6B01G162200.1	Wheat	plasma membrane	37.4	43.98
Solyc03g093400.2.1	Tomato	plasma membrane	49.59	43.45
TraesCS2B01G338700.1	Wheat	vacuole	37.24	42.33
TraesCS2B01G338600.1	Wheat	plasma membrane	31.22	42.01
Os03t0101500-01	Rice	cytosol	0.81	1.93

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF18	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G371700	EnsemblPlants:TraesCS4B01G371700.2	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:657172200..657176401

Molecular Weight (calculated)

67039.7 Da

IEP (calculated)

8.351

GRAVY (calculated)

0.495

Length

615 amino acids

Sequence
(BLAST)

001: MAIGGAFVEG PAGYSGRVTS FVVLSCIVAG SGGILFGYDL GISDFRVGGE KGEGTVIKEQ LILTLDGRTC GGARLEALPP CLSFFLAPDW MDHGWMGLPF
101: PSLPCAFNTY PTHPLPVLLR TRMHDCSVFT TTCTGGVTSM ESFLKKFFPD VYHQMHGDKA AAVSNYCRFD SELLTVFTSS LYVAGLVATL FASSVTTRYG
201: RRASILIGGS VFIAGSAFGG AAVNVYMLLV NRILLGIGLG FTNQSIPLYL SEMAPPQYRG AINNGFELCI SIGILIANVI NYGVQKIEGG WGWRISLSMA
301: AVPAAFLTIG AIFLPETPSF LIQRDGNVDE AKMMLQRLRG TTGVQKELDD LVTASNISRA IKNPYRNILK KKYRPQLVIA LLIPFFNQVT GINVINFYAP
401: VMFRTIGLGE SAALMSAVVT RLCATVANIV AMVVVDKFGR RKLLLVGGVQ MILSQFTVGA ILAVKFKDHG VMDKEYGYLV LVIMCVFVAG FAWSWGPLTY
501: LVPTEICPLE IRSAGQSVVI AVIFLMTFVI GQTFLNMLCH LKFGTFFLFG GWVCVMTLFV FFFLPETKQL PMEQMEQVWR RHWFWKRIVG EGEEEADQAQ
601: TGAGAIAMSA AAHSS

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.