Factsheet for TraesCS4B01G346400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G341400.1	Wheat	plasma membrane	97.49	97.86
TraesCS5A01G515200.1	Wheat	plasma membrane	97.29	97.67
HORVU4Hr1G084740.3	Barley	golgi, plasma membrane	96.13	96.32
Os04t0452600-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	68.47	74.06
TraesCS2B01G338400.1	Wheat	peroxisome, plasma membrane, vacuole	67.5	68.43
TraesCS2B01G339100.1	Wheat	peroxisome, plasma membrane, vacuole	62.28	62.77
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	60.35	61.3
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	57.25	59.2
TraesCS2B01G338500.1	Wheat	plasma membrane	53.97	54.28
VIT_18s0001g05570.t01	Wine grape	plasma membrane	51.06	52.8
TraesCS2B01G338700.1	Wheat	vacuole	53.0	50.65
PGSC0003DMT400016373	Potato	plasma membrane	50.29	50.58
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	48.74	49.8
KRH62357	Soybean	plasma membrane	48.74	49.7
Solyc04g074070.1.1	Tomato	plasma membrane	48.74	49.51
CDY66862	Canola	plasma membrane	48.16	49.21
TraesCS2B01G338600.1	Wheat	plasma membrane	43.33	49.02
KRH62356	Soybean	plasma membrane	48.16	48.92
KRH53073	Soybean	plasma membrane	48.16	48.92
KRH16713	Soybean	plasma membrane	47.78	48.62
CDX91766	Canola	golgi, plasma membrane, vacuole	47.39	48.61
KRH62355	Soybean	plasma membrane	47.2	48.03
KRH18902	Soybean	plasma membrane	46.62	48.01
TraesCS2B01G232900.1	Wheat	plasma membrane	48.36	47.53
KRH16714	Soybean	plasma membrane	46.42	47.34
TraesCS7B01G185800.1	Wheat	plastid	46.23	46.77
TraesCS3B01G518900.1	Wheat	plasma membrane	45.84	46.11
TraesCS5B01G001000.1	Wheat	golgi, plasma membrane, vacuole	45.84	45.84
TraesCS2B01G282400.1	Wheat	plasma membrane	45.84	45.84
TraesCS5B01G225100.1	Wheat	plasma membrane	46.03	45.77
TraesCS3B01G518800.1	Wheat	plasma membrane	44.87	45.67
TraesCS4B01G243500.1	Wheat	plasma membrane	45.07	45.33
TraesCS3B01G120300.1	Wheat	plasma membrane	40.23	45.12
TraesCS1B01G454800.1	Wheat	golgi, plasma membrane, vacuole	43.33	44.44
Bra036755.1-P	Field mustard	plasma membrane	47.97	43.97
TraesCS1B01G232900.1	Wheat	plasma membrane	44.29	43.95
TraesCS5B01G225300.1	Wheat	plasma membrane	42.94	43.27
TraesCS5B01G180800.1	Wheat	plasma membrane	44.1	43.18
TraesCS5B01G225400.1	Wheat	plasma membrane	43.91	42.99
TraesCS6B01G384700.1	Wheat	plasma membrane	43.52	42.86
TraesCS1B01G353800.1	Wheat	plasma membrane	40.04	40.51
TraesCS4B01G371700.2	Wheat	plasma membrane	44.49	37.4
TraesCS6B01G162200.1	Wheat	plasma membrane	36.75	36.33

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF92	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G346400	EnsemblPlants:TraesCS4B01G346400.1	TIGR:cd06174	SEG:seg

Description

No Description!

Coordinates

chr4B:-:640025726..640027367

Molecular Weight (calculated)

55016.0 Da

IEP (calculated)

10.306

GRAVY (calculated)

0.615

Length

517 amino acids

Sequence
(BLAST)

001: MAVGAVGVEA GHGSPLAYGG ELTFTVVMTC LVAASGGLIF GYDIGISGGV SQMKPFLQTF FPTVLRRMAD AKRSQYCIFD SHALTSFTSS LYIAGLVSSF
101: AAGRVTRSLG RRGVMLLGGA LFFAGGAMTG AAMNLAMLIV GRMLLGFGVG FTNQATPLYL AEMAPARWRG SLGVAFQFFL ALGILIANLV NYGTASLEWG
201: WRLSLGLAGA PAIVIFVGAL FLTDTPSSFI MRGKADLARS ALLRVRGASA NVDAELKDIT RAVEAARSSE EGAFRKLLAD RQYRPHLTFS VVVPFCHQLS
301: GMMVLTFFSP LVFRIAGFGS NAALMGAVIL AAVKFGSLIL STLVIDRYGR KVLVVVGAVI MVLCQVANAW IMGAKAADGP IPRAYGVALL ALTCVQGAGF
401: GMSWAPLIWI IPGEIFPMEI RSAGQSVSVS TTLGLTFLQT QTFLALLCRL KYATFAYYAA WVVALTAFVL VFLPETKGVP LESMGSVWDR HWYWKRFVGD
501: GHGHGRRKPP SSPSAST

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.