CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021775_P001	Maize	plasma membrane	95.29	96.56
TraesCS2B01G232900.1	Wheat	plasma membrane	92.09	92.97
Os07t0559700-00	Rice	plasma membrane	92.47	92.64
TraesCS2A01G205500.1	Wheat	plasma membrane	91.71	92.59
HORVU2Hr1G041080.6	Barley	plasma membrane	91.15	91.15
EER97830	Sorghum	plasma membrane	76.65	78.27
GSMUA_Achr9P24550_001	Banana	golgi, plasma membrane, vacuole	76.46	78.08
GSMUA_Achr9P02830_001	Banana	plasma membrane	70.81	77.85
GSMUA_Achr2P14120_001	Banana	plasma membrane	75.33	76.63
GSMUA_Achr8P03770_001	Banana	golgi, plasma membrane, vacuole	69.87	76.34
OQU85892	Sorghum	plasma membrane	72.13	73.23
EES13444	Sorghum	plasma membrane	69.3	70.63
EES03141	Sorghum	golgi, plasma membrane, vacuole	65.16	67.98
EER93920	Sorghum	golgi, plasma membrane, vacuole	67.61	67.35
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	62.9	66.14
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	62.71	65.81
CDY62955	Canola	extracellular, plasma membrane	25.61	65.38
KRH40901	Soybean	plasma membrane	62.9	65.23
KRH40905	Soybean	plasma membrane	62.71	65.04
KRG90624	Soybean	plasma membrane	62.15	64.58
CDY66084	Canola	golgi, plasma membrane, vacuole	44.82	64.5
Bra039642.1-P	Field mustard	golgi, plasma membrane, vacuole	62.34	64.15
CDY53930	Canola	golgi, plasma membrane, vacuole	62.34	64.15
AT3G19930.1	Thale cress	plasma membrane	61.96	64.01
KRH36130	Soybean	plasma membrane	61.58	63.99
CDY29325	Canola	golgi, plasma membrane, vacuole	62.15	63.95
Bra001766.1-P	Field mustard	plasma membrane	61.77	63.81
Bra038243.1-P	Field mustard	plasma membrane	61.39	63.8
Bra038245.1-P	Field mustard	plasma membrane	61.39	63.8
CDY33432	Canola	plasma membrane	61.39	63.8
CDY68476	Canola	plasma membrane	13.18	63.64
AT1G50310.1	Thale cress	plasma membrane	61.96	63.64
CDY33434	Canola	plasma membrane	61.21	63.6
CDY33433	Canola	cytosol, peroxisome, plasma membrane	35.4	63.51
CDX82272	Canola	plasma membrane	51.22	63.4
Bra038242.1-P	Field mustard	plasma membrane	61.21	63.23
CDY62951	Canola	plasma membrane	51.79	63.22
CDY22788	Canola	golgi, plasma membrane, vacuole	61.39	63.18
CDY42509	Canola	golgi, plasma membrane, vacuole	61.39	63.18
Bra018841.1-P	Field mustard	golgi, plasma membrane, vacuole	61.39	63.18
CDY36072	Canola	plasma membrane	51.04	63.17
CDY33431	Canola	plasma membrane	51.04	63.17
CDY25359	Canola	plasma membrane	51.04	63.17
CDY38688	Canola	plasma membrane	51.04	62.88
AT3G19940.1	Thale cress	plasma membrane	60.64	62.65
AT5G23270.1	Thale cress	plasma membrane	60.64	62.65
Bra022468.1-P	Field mustard	plasma membrane	56.12	61.7
CDY62952	Canola	golgi, plasma membrane, vacuole	61.02	61.6
CDY24593	Canola	plasma membrane	51.04	61.59
CDY02218	Canola	plasma membrane	49.53	60.88
CDY45759	Canola	plasma membrane	59.13	60.15
Bra013029.1-P	Field mustard	golgi, plasma membrane, vacuole	42.37	59.68
EER96733	Sorghum	mitochondrion, plasma membrane	57.44	58.88
EER92634	Sorghum	plasma membrane	55.74	57.25
CDY62956	Canola	cytosol	4.33	56.1
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	54.8	55.85
EES04558	Sorghum	plasma membrane	54.61	55.66
KXG40430	Sorghum	plasma membrane	54.43	53.72
EER98187	Sorghum	plasma membrane	49.72	51.56
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	50.85	51.33
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	49.53	51.27
KXG28819	Sorghum	golgi, plasma membrane, vacuole	50.28	50.95
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	36.16	50.66
KXG26442	Sorghum	peroxisome	50.66	49.63
EES18290	Sorghum	plasma membrane	44.26	48.96
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	46.52	48.43
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	42.37	46.11
EES10920	Sorghum	plasma membrane	44.44	45.3
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	42.75	44.42
EES11734	Sorghum	plasma membrane	41.24	42.44
KXG25760	Sorghum	plasma membrane	40.49	42.07

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EntrezGene:8056329	UniProt:C5XBJ4	EnsemblPlants:EER99540	ProteinID:EER99540
ProteinID:EER99540.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF336	EnsemblPlantsGene:SORBI_3002G338500	SUPFAM:SSF103473
unigene:Sbi.18603	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001A8422B
RefSeq:XP_002463019.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:70573682..70576264

Molecular Weight (calculated)

57644.4 Da

IEP (calculated)

9.095

GRAVY (calculated)

0.579

Length

531 amino acids

Sequence
(BLAST)

001: MAGGVVVNAG GGKDYPGKLT MFVLFACIVA ATGGLIFGYD IGISGGVTSM NPFLMKFFPS VYHKEQEAER NQSNQYCKFD SQLLTMFTSS LYLAALVASF
101: VAATVTRVAG RKWSMFGGGV TFLVGAALNG AAKDVVMLIL GRVLLGIGVG FANQSVPVYL SEMAPARLRG MLNIGFQLMI TIGILCANLI NYGTAKIKGG
201: WGWRVSLALA AVPAAIIAVG ALFLPDTPNS LIDRGYTDDA KRMLKRVRGT EDVEEEYNDL VAASEESKLV AHPWRNILQP RYRPQLVMAI AIPMFQQLTG
301: INVIMFYAPV LFKTLGFADD ASLMSAVITG LVNVFATFVS IVTVDRLGRR KLFLQGGTQM LACQIVVGSL IGAKFGFSGV AEIPKGYAAI VVFFICAYVA
401: GFAWSWGPLG WLVPSEIFPL EIRSAGQSIN VSVNMLCTFI IAQAFLPMLC RFKFILFFFF GAWVVVMTIF VALFLPETKN VPIEEMVLVW KSHWYWGRFI
501: RDEDVHVGAD LEMPSANGNG KVGAGKLVGM Q

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.