CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003469_P001	Maize	peroxisome, plasma membrane, vacuole	91.75	93.18
TraesCS2B01G338500.1	Wheat	plasma membrane	76.78	77.82
TraesCS2A01G340700.1	Wheat	plasma membrane	76.78	77.82
TraesCS2D01G318300.1	Wheat	plasma membrane	76.58	77.63
Os04t0453200-01	Rice	golgi, plasma membrane, vacuole	72.55	74.56
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	68.71	70.06
EES11734	Sorghum	plasma membrane	64.3	64.92
KXG25760	Sorghum	plasma membrane	62.96	64.19
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	58.54	59.45
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	56.62	57.96
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	56.62	57.84
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	54.32	56.6
KXG26442	Sorghum	peroxisome	56.05	53.87
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	48.94	52.25
VIT_18s0001g05570.t01	Wine grape	plasma membrane	50.1	52.2
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	49.33	50.79
KRH62357	Soybean	plasma membrane	48.37	49.7
KRH16713	Soybean	plasma membrane	47.98	49.21
CDX91766	Canola	golgi, plasma membrane, vacuole	47.41	49.01
CDY66862	Canola	plasma membrane	47.41	48.81
KRH53073	Soybean	plasma membrane	46.45	47.54
KRH62355	Soybean	plasma membrane	46.26	47.44
KRH18902	Soybean	plasma membrane	45.49	47.21
KRH62356	Soybean	plasma membrane	46.07	47.15
KRH16714	Soybean	plasma membrane	45.87	47.14
EER97830	Sorghum	plasma membrane	46.83	46.92
OQU85892	Sorghum	plasma membrane	46.64	46.46
Solyc04g074070.1.1	Tomato	plasma membrane	44.72	45.78
PGSC0003DMT400016373	Potato	plasma membrane	44.91	45.53
EER96733	Sorghum	mitochondrion, plasma membrane	45.11	45.37
EES03141	Sorghum	golgi, plasma membrane, vacuole	43.76	44.79
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	44.53	44.53
EER99540	Sorghum	golgi, plasma membrane, vacuole	45.3	44.44
Bra036755.1-P	Field mustard	plasma membrane	47.22	43.62
EES13444	Sorghum	plasma membrane	42.99	42.99
KXG28819	Sorghum	golgi, plasma membrane, vacuole	42.99	42.75
EER98187	Sorghum	plasma membrane	41.84	42.58
EER93920	Sorghum	golgi, plasma membrane, vacuole	43.19	42.21
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	30.13	41.42
EES18290	Sorghum	plasma membrane	37.81	41.04
EER92634	Sorghum	plasma membrane	40.5	40.81
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	41.07	40.68
KXG40430	Sorghum	plasma membrane	41.84	40.52
EES04558	Sorghum	plasma membrane	38.77	38.77

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EntrezGene:8073408	UniProt:C5Y9Q3	EnsemblPlants:EES10920	ProteinID:EES10920
ProteinID:EES10920.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF33	EnsemblPlantsGene:SORBI_3006G102400	SUPFAM:SSF103473
InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001A86E3E	RefSeq:XP_002446592.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:47272269..47275801

Molecular Weight (calculated)

55691.3 Da

IEP (calculated)

9.279

GRAVY (calculated)

0.527

Length

521 amino acids

Sequence
(BLAST)

001: MAGGGGFAAA AERGHARDDD GYGGRGGVTV PVVVTCLMAA SCGLIFGYDI GVSGGVTQME SFLMKFFPEV SSAMTKNAKH DAYCKYDDQR LTAFTSSLYI
101: AAMVSSLVAS RVTRTVGRST VMLIGGVLFL AGSAINAGAV NVAMLIIGRM LLGFGVGFTT QAAPLYLAET SPARWRGAFT TAYNIFQVQG ALAATVTNYF
201: TNRIPGWGWR VSLGLAAVPA AVVVLGALLV PDTPSSLVLR GDTDSARASL QRLRGPGAET DAELKDIVRA VEDARRNDEG AYERLVRGKG YGHYLVMVVA
301: IPSFFDLTGV IVMAVFSPVL FRTVGFSSQK AIFGSVVLSL VNLASSLLSS FVMDRAGRRF LFLAGGAAMM ICQLAMSCIL AGHLGKQNAA TMPRDYAVAV
401: LVLMCLYTFS FGVSWGPLKW VVPSEIYPVE IRSAAQALTV SIALCLSFAQ TQVFVSLLCA MKHGIFLFYA GWVLAMTAFV AAFLPETKGV PLEAMRAVWA
501: GHWYWRRFVR DAKQEVQVNC L

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.