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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:golgi
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 80.69 80.08
Os09t0297300-00 Rice plasma membrane 78.2 78.2
EER99540 Sorghum golgi, plasma membrane, vacuole 73.23 72.13
EER97830 Sorghum plasma membrane 69.98 70.38
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 68.83 69.23
GSMUA_Achr9P02830_001 Banana plasma membrane 63.29 68.53
GSMUA_Achr2P14120_001 Banana plasma membrane 68.26 68.39
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 63.29 68.11
EER93920 Sorghum golgi, plasma membrane, vacuole 66.54 65.29
EES13444 Sorghum plasma membrane 65.01 65.26
EES03141 Sorghum golgi, plasma membrane, vacuole 63.48 65.23
CDY62956 Canola cytosol 4.97 63.41
CDY66084 Canola golgi, plasma membrane, vacuole 44.74 63.41
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 60.42 62.57
KRH40901 Soybean plasma membrane 60.8 62.11
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 60.04 62.06
KRH40905 Soybean plasma membrane 60.61 61.91
CDY68476 Canola plasma membrane 13.0 61.82
Bra038245.1-P Field mustard plasma membrane 59.85 61.25
Bra038243.1-P Field mustard plasma membrane 59.85 61.25
CDY33432 Canola plasma membrane 59.85 61.25
CDY33434 Canola plasma membrane 59.66 61.06
AT1G50310.1 Thale cress plasma membrane 60.23 60.93
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 43.79 60.74
AT3G19930.1 Thale cress plasma membrane 59.46 60.51
AT3G19940.1 Thale cress plasma membrane 59.46 60.51
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 59.66 60.47
CDY42509 Canola golgi, plasma membrane, vacuole 59.66 60.47
CDY22788 Canola golgi, plasma membrane, vacuole 59.66 60.47
Bra001766.1-P Field mustard plasma membrane 59.27 60.31
KRH36130 Soybean plasma membrane 58.89 60.27
KRG90624 Soybean plasma membrane 58.89 60.27
CDY53930 Canola golgi, plasma membrane, vacuole 59.46 60.27
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 59.46 60.27
CDY29325 Canola golgi, plasma membrane, vacuole 59.46 60.27
CDY33433 Canola cytosol, peroxisome, plasma membrane 34.03 60.14
CDY25359 Canola plasma membrane 48.95 59.67
CDY36072 Canola plasma membrane 48.95 59.67
CDX82272 Canola plasma membrane 48.95 59.67
CDY62951 Canola plasma membrane 49.52 59.54
CDY33431 Canola plasma membrane 48.76 59.44
CDY38688 Canola plasma membrane 48.76 59.16
AT5G23270.1 Thale cress plasma membrane 58.13 59.14
CDY62955 Canola extracellular, plasma membrane 23.52 59.13
CDY62952 Canola golgi, plasma membrane, vacuole 59.46 59.13
Bra038242.1-P Field mustard plasma membrane 57.94 58.95
CDY45759 Canola plasma membrane 58.7 58.81
CDY02218 Canola plasma membrane 48.37 58.56
EER96733 Sorghum mitochondrion, plasma membrane 57.74 58.3
CDY24593 Canola plasma membrane 48.95 58.18
Bra022468.1-P Field mustard plasma membrane 53.35 57.76
EER89165 Sorghum cytosol, peroxisome, plasma membrane 55.83 56.05
EER92634 Sorghum plasma membrane 55.26 55.9
EES10921 Sorghum peroxisome, plasma membrane, vacuole 53.73 54.78
KXG28819 Sorghum golgi, plasma membrane, vacuole 53.35 53.24
EES04558 Sorghum plasma membrane 52.77 52.98
KXG40430 Sorghum plasma membrane 54.49 52.97
OQU89290 Sorghum golgi, peroxisome, plasma membrane 38.05 52.51
EER98187 Sorghum plasma membrane 51.24 52.34
KXG26442 Sorghum peroxisome 53.73 51.84
EES18290 Sorghum plasma membrane 46.85 51.04
OQU92134 Sorghum peroxisome, plasma membrane, vacuole 50.86 50.57
OQU81689 Sorghum extracellular, plasma membrane, vacuole 48.57 49.8
OQU85192 Sorghum peroxisome, plasma membrane, vacuole 44.36 47.54
EES10920 Sorghum plasma membrane 46.46 46.64
EES10919 Sorghum peroxisome, plasma membrane, vacuole 45.12 46.18
EES11734 Sorghum plasma membrane 42.26 42.83
KXG25760 Sorghum plasma membrane 41.68 42.66
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A1Z5RQ55ncoils:CoilGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfEnsemblPlants:OQU85892
ProteinID:OQU85892ProteinID:OQU85892.1PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF160EnsemblPlantsGene:SORBI_3004G332700SUPFAM:SSF103473InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000B8BA41CSEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:66537545..66539125
Molecular Weight (calculated)
55630.7 Da
IEP (calculated)
9.146
GRAVY (calculated)
0.578
Length
523 amino acids
Sequence
(BLAST)
001: MAGGVAVAPS ASAGKRQDYP GGLTQFVFMA CTVAATGGLI FGYDIGISGG VTSMDPFLSR FFPSKQAELL DGGNQYCKFD SQLLTLFTSS LYVSALVASL
101: FAASVTRAAG RKWSMFAGGV TFLAGCALNG AAVNVAMLIL GRVLLGVGVG FANQSVPVYL SEMAPMRMRG MLNNGFQLMI TLGILLANLI NYGTVKIAGG
201: WGWRLSLGLA AVPAAIITVG SLFLPDTPNS LLERGRPEEA KRMLRRVRGT DDVAAEYDDL VAAGEASRAV THPWRDIRQR RYRPQLVMAV AIPLFQQLTG
301: INVIMFYAPV LFKTLGFGGT ASLMSAVITG LVNLVSTLVS VFTVDRVGRR ALFLEGGAQM LAAQVAVGAL IGAKFGWSGV ATVPAGYAAA TVVVMCVYVA
401: GFAWSWGPLG WLVPSEVMPL EVRPAGQSIT VAVNMLMTFA VAQAFLPMLC RLKFVLFFAF AACVVVMTLF VALFLPETKG VPIEDMAGVW KTHWYWKRFV
501: NDGDDTDGHG VDIELGCVGE AKK
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.