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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER99540 Sorghum golgi, plasma membrane, vacuole 96.56 95.29
Os07t0559700-00 Rice plasma membrane 92.75 91.7
TraesCS2A01G205500.1 Wheat plasma membrane 91.98 91.64
TraesCS2B01G232900.1 Wheat plasma membrane 91.79 91.44
HORVU2Hr1G041080.6 Barley plasma membrane 91.22 90.02
Zm00001d018627_P001 Maize plasma membrane 78.05 78.2
GSMUA_Achr9P02830_001 Banana plasma membrane 71.95 78.05
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 76.14 76.73
GSMUA_Achr2P14120_001 Banana plasma membrane 75.57 75.86
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 70.23 75.72
Zm00001d049467_P001 Maize plasma membrane 70.23 71.6
Zm00001d032409_P001 Maize plasma membrane 69.66 68.1
Zm00001d044245_P001 Maize plasma membrane 65.27 67.19
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 64.31 66.73
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 64.12 66.4
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 61.83 66.12
CDY62955 Canola extracellular, plasma membrane 26.14 65.87
KRH40901 Soybean plasma membrane 63.36 64.84
KRH40905 Soybean plasma membrane 63.17 64.65
CDY53930 Canola golgi, plasma membrane, vacuole 63.55 64.53
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 63.55 64.53
CDY29325 Canola golgi, plasma membrane, vacuole 63.36 64.34
AT3G19930.1 Thale cress plasma membrane 62.98 64.2
Bra001766.1-P Field mustard plasma membrane 62.98 64.2
KRG90624 Soybean plasma membrane 62.6 64.19
CDY42509 Canola golgi, plasma membrane, vacuole 62.98 63.95
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 62.98 63.95
CDY22788 Canola golgi, plasma membrane, vacuole 62.98 63.95
CDY66084 Canola golgi, plasma membrane, vacuole 44.85 63.69
CDY68476 Canola plasma membrane 13.36 63.64
CDY33431 Canola plasma membrane 52.1 63.64
CDX82272 Canola plasma membrane 52.1 63.64
AT1G50310.1 Thale cress plasma membrane 62.79 63.64
Bra038242.1-P Field mustard plasma membrane 62.4 63.62
CDY33432 Canola plasma membrane 62.02 63.6
CDY62951 Canola plasma membrane 52.67 63.45
CDY33434 Canola plasma membrane 61.83 63.41
Bra038243.1-P Field mustard plasma membrane 61.83 63.41
Bra038245.1-P Field mustard plasma membrane 61.83 63.41
KRH36130 Soybean plasma membrane 61.83 63.41
CDY36072 Canola plasma membrane 51.91 63.4
CDY25359 Canola plasma membrane 51.91 63.4
CDY38688 Canola plasma membrane 52.1 63.34
AT3G19940.1 Thale cress plasma membrane 61.83 63.03
CDY33433 Canola cytosol, peroxisome, plasma membrane 35.5 62.84
AT5G23270.1 Thale cress plasma membrane 61.26 62.45
CDY24593 Canola plasma membrane 51.91 61.82
Bra022468.1-P Field mustard plasma membrane 56.68 61.49
CDY02218 Canola plasma membrane 50.57 61.34
CDY62952 Canola golgi, plasma membrane, vacuole 61.45 61.22
CDY45759 Canola plasma membrane 59.73 59.96
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 42.56 59.15
Zm00001d028230_P001 Maize plasma membrane 56.68 57.78
Zm00001d020463_P002 Maize plasma membrane 57.63 57.74
Zm00001d045395_P001 Maize plasma membrane 56.3 56.95
Zm00001d027268_P001 Maize plasma membrane 53.82 53.71
CDY62956 Canola cytosol 4.2 53.66
Zm00001d019138_P001 Maize plasma membrane 51.72 52.83
Zm00001d053846_P001 Maize plasma membrane 55.34 52.63
Zm00001d032906_P001 Maize plasma membrane 50.95 52.56
Zm00001d000183_P001 Maize peroxisome, plasma membrane, vacuole 51.91 52.31
Zm00001d025572_P001 Maize peroxisome, plasma membrane, vacuole 50.19 51.87
Zm00001d005594_P001 Maize plasma membrane 50.19 50.77
Zm00001d020071_P001 Maize plasma membrane 49.81 50.0
Zm00001d003468_P001 Maize peroxisome, plasma membrane, vacuole 34.35 47.87
Zm00001d025573_P001 Maize plasma membrane 41.6 47.81
Zm00001d003471_P001 Maize plasma membrane 50.57 47.58
Zm00001d050860_P001 Maize plasma membrane 45.61 45.87
Zm00001d003469_P001 Maize peroxisome, plasma membrane, vacuole 44.47 45.42
Zm00001d016919_P001 Maize plasma membrane 36.26 42.51
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A1D6IFG4GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfProteinID:ONM58415.1PFAM:PF00083
PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF336
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000220A32E
EnsemblPlantsGene:Zm00001d021775EnsemblPlants:Zm00001d021775_P001EnsemblPlants:Zm00001d021775_T001SEG:seg::
Description
Sugar carrier protein C
Coordinates
chr7:-:162845891..162848484
Molecular Weight (calculated)
56916.5 Da
IEP (calculated)
9.247
GRAVY (calculated)
0.606
Length
524 amino acids
Sequence
(BLAST)
001: MAGGVVVSSG GGKDYPGKLT MFVLFACIVA ATGGLIFGYD IGISGGVTSM NPFLMKFFPS VYRKEQEAER NQSNQYCKFD SQLLTMFTSS LYLAALVASF
101: FAATVTRVAG RKWSMFGGGV TFLVGAALNG AAKDVGMLIL GRVLLGVGVG FANQSVPVYL SEMAPARLRG MLNIGFQLMV TIGILCANLI NYGTAKIRGG
201: WGWRVSLALA AVPAAIIAVG ALFLPDTPNS LIDRGYTDAA KRMLKRVRGT DDVEEEYSDL VAASDESKLV AHPWRNILLP RYRPQLVMAI AIPMFQQLTG
301: INVIMFYAPV LFKTLGFADD ASLMSAVITG LVNVFATFVS IVTVDRLGRR KLFLQGGTQM LACQIVVGSL IGAKFGFSGV AEIPKGYAAI VVLFICAYVA
401: GFAWSWGPLG WLVPSEIFPL EIRSAGQSIN VSVNMFCTFI IAQAFLPMLC RFKFILFFFF GAWVVVMTIF VALFLPETKN VPIEEMVLVW KAHWYWGRFI
501: RDEDVHVGAD LEMPSANAKL GGMQ
Best Arabidopsis Sequence Match ( AT3G19930.1 )
(BLAST)
001: MAGGFVSQTP GVRNYNYKLT PKVFVTCFIG AFGGLIFGYD LGISGGVTSM EPFLEEFFPY VYKKMKSAHE NEYCRFDSQL LTLFTSSLYV AALVSSLFAS
101: TITRVFGRKW SMFLGGFTFF IGSAFNGFAQ NIAMLLIGRI LLGFGVGFAN QSVPVYLSEM APPNLRGAFN NGFQVAIIFG IVVATIINYF TAQMKGNIGW
201: RISLGLACVP AVMIMIGALI LPDTPNSLIE RGYTEEAKEM LQSIRGTNEV DEEFQDLIDA SEESKQVKHP WKNIMLPRYR PQLIMTCFIP FFQQLTGINV
301: ITFYAPVLFQ TLGFGSKASL LSAMVTGIIE LLCTFVSVFT VDRFGRRILF LQGGIQMLVS QIAIGAMIGV KFGVAGTGNI GKSDANLIVA LICIYVAGFA
401: WSWGPLGWLV PSEISPLEIR SAAQAINVSV NMFFTFLVAQ LFLTMLCHMK FGLFFFFAFF VVIMTIFIYL MLPETKNVPI EEMNRVWKAH WFWGKFIPDE
501: AVNMGAAEMQ QKSV
Arabidopsis Description
STP4STP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Z0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.