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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70995
CDX88803
CDX92368
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77210.1 CDX70995 AT5G22290.1 21798944
AT1G77210.1 CDX88803 AT5G22290.1 21798944
AT1G77210.1 CDX92368 AT5G22290.1 21798944
AT1G77210.1 CDY09128 AT5G22290.1 21798944
AT1G77210.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87534 Canola plasma membrane 93.54 99.38
AT1G77210.1 Thale cress plasma membrane 90.61 91.87
Solyc05g018230.2.1 Tomato plasma membrane 57.93 72.2
PGSC0003DMT400070558 Potato plasma membrane 72.41 71.71
VIT_11s0016g03400.t01 Wine grape plasma membrane 71.82 71.68
PGSC0003DMT400000990 Potato plasma membrane 63.8 70.56
Solyc12g008320.1.1 Tomato plasma membrane 69.67 69.13
OQU89290 Sorghum golgi, peroxisome, plasma membrane 50.68 68.34
GSMUA_Achr6P22680_001 Banana plasma membrane 69.08 67.75
KRH76334 Soybean plasma membrane 67.51 67.65
KRH39352 Soybean plasma membrane 67.51 67.38
Zm00001d005594_P001 Maize plasma membrane 67.71 66.8
TraesCS5B01G180800.1 Wheat plasma membrane 68.88 66.67
TraesCS5D01G187100.1 Wheat plasma membrane 68.88 66.54
TraesCS5A01G182600.1 Wheat plasma membrane 68.49 66.16
Zm00001d020071_P001 Maize plasma membrane 67.51 66.09
HORVU5Hr1G055850.2 Barley plasma membrane 67.91 65.47
KRH60234 Soybean mitochondrion 65.36 65.36
KRH41519 Soybean plasma membrane 65.17 65.17
CDY62956 Canola cytosol 5.09 63.41
CDY07098 Canola plasma membrane 55.77 56.1
CDX90958 Canola plasma membrane 56.16 55.95
CDY22024 Canola plasma membrane 55.38 55.71
CDY67102 Canola cytosol, plasma membrane, vacuole 51.27 52.09
CDY19773 Canola plasma membrane 54.21 52.07
CDX87052 Canola peroxisome, plasma membrane, vacuole 54.01 51.88
CDY26777 Canola plasma membrane 46.38 51.52
CDY66084 Canola golgi, plasma membrane, vacuole 36.99 51.22
CDY47467 Canola plasma membrane 48.92 50.92
CDX80558 Canola plasma membrane 50.1 50.49
CDY33434 Canola plasma membrane 50.49 50.49
CDY33433 Canola cytosol, peroxisome, plasma membrane 29.16 50.34
CDY33432 Canola plasma membrane 50.29 50.29
CDY29325 Canola golgi, plasma membrane, vacuole 49.71 49.22
CDY62952 Canola golgi, plasma membrane, vacuole 50.49 49.05
CDY62955 Canola extracellular, plasma membrane 19.96 49.04
CDX97945 Canola plasma membrane 49.9 48.85
CDY42509 Canola golgi, plasma membrane, vacuole 49.32 48.84
CDY53930 Canola golgi, plasma membrane, vacuole 49.32 48.84
CDY22788 Canola golgi, plasma membrane, vacuole 49.32 48.84
CDX82827 Canola golgi, plasma membrane, vacuole 48.73 48.54
CDY19352 Canola plasma membrane 49.51 48.47
CDY34842 Canola plasma membrane 49.32 48.37
CDY45759 Canola plasma membrane 49.32 48.28
CDX79066 Canola plasma membrane 48.34 48.15
CDY02218 Canola plasma membrane 40.12 47.45
CDY05216 Canola plasma membrane 46.58 47.22
CDY27726 Canola golgi, plasma membrane, vacuole 46.38 47.02
CDY18836 Canola plasma membrane 46.18 46.55
CDY52634 Canola plasma membrane 45.6 46.51
CDX88227 Canola plasma membrane 45.21 46.29
CDY49992 Canola golgi, plasma membrane, vacuole 45.99 46.26
CDX74116 Canola plasma membrane 45.79 46.06
CDY34655 Canola plasma membrane 49.32 45.24
CDY62951 Canola plasma membrane 37.77 44.37
CDX82272 Canola plasma membrane 36.99 44.06
CDY25359 Canola plasma membrane 36.99 44.06
CDY36072 Canola plasma membrane 36.79 43.82
CDY33431 Canola plasma membrane 36.79 43.82
CDX86492 Canola plasma membrane 42.66 43.78
CDY68476 Canola plasma membrane 9.39 43.64
CDY06700 Canola plasma membrane 42.47 43.49
CDY38688 Canola plasma membrane 36.59 43.39
CDY15608 Canola plasma membrane 42.27 43.37
CDY10269 Canola plasma membrane 42.27 43.29
CDY24593 Canola plasma membrane 36.99 42.95
CDY66862 Canola plasma membrane 42.27 42.69
CDX91766 Canola golgi, plasma membrane, vacuole 42.07 42.66
CDY02138 Canola golgi, plasma membrane, vacuole 34.05 40.75
CDY23062 Canola golgi, plasma membrane, vacuole 33.86 40.52
GSMUA_Achr8P27410_001 Banana golgi, peroxisome, plasma membrane 54.01 39.71
CDX91815 Canola plasma membrane 55.97 34.05
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078DGJ0EnsemblPlants:CDX88350ProteinID:CDX88350ProteinID:CDX88350.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00147871001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF14SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI0004EEE6B3SEG:seg:::
Description
BnaC06g37940D
Coordinates
chrLK031855:-:497682..500443
Molecular Weight (calculated)
56676.8 Da
IEP (calculated)
8.298
GRAVY (calculated)
0.468
Length
511 amino acids
Sequence
(BLAST)
001: MAGGVLADEG ALKRAHLYEH RITAYFIFAC IVGSLGGSLF GYDLGVSGGV TSMDDFLIEF FPGIYKRKQN HMHETDYCKY DNQILTLFTS SLYFAGLIST
101: FGASYVTRIY GRRGSILVGS VSFFLGGVAN AAAKNILIRI FHPAIRIDHT FNILFNLCAV PLYLSEMAPA KIRGTVNQLF QLTTCIGILV ANLINYKTDQ
201: IHPWGWRLSL GLAVVPATLM FIGGLFLPET PNSLVEQGKL EEAKAVLIKV RGTNNIEAEF QDLVEASEAA RAVKNPFRNL FARRNRPQLV IGAIGLPAFQ
301: QLTGMNSILF YAPVMFQSLG FGGSASLISS TMTNAALVIA AIMSMYSADK FGRRFLLLEA SFEMFCYMVV VGVTLALKFG EGKELPKSLG LVLVILICLF
401: VLAYGRSWGP MGWLVPSEIF PLETRSAGQS VVVCVNLFFT ALIAQCFLVS LCHLKYGIFL LFAGLVFGMG SFVYFLLPET KQVPIEEVYL LWRQHWLWKR
501: YVEDHDEKTD Q
Best Arabidopsis Sequence Match ( AT1G77210.1 )
(BLAST)
001: MAGGALTDEG GLKRAHLYEH RITSYFIFAC IVGSMGGSLF GYDLGVSGGV TSMDDFLKEF FPGIYKRKQM HLNETDYCKY DNQILTLFTS SLYFAGLIST
101: FGASYVTRIY GRRGSILVGS VSFFLGGVIN AAAKNILMLI LGRIFLGIGI GFGNQAVPLY LSEMAPAKIR GTVNQLFQLT TCIGILVANL INYKTEQIHP
201: WGWRLSLGLA TVPAILMFLG GLVLPETPNS LVEQGKLEKA KAVLIKVRGT NNIEAEFQDL VEASDAARAV KNPFRNLLAR RNRPQLVIGA IGLPAFQQLT
301: GMNSILFYAP VMFQSLGFGG SASLISSTIT NAALVVAAIM SMYSADKFGR RFLLLEASVE MFCYMVVVGV TLALKFGEGK ELPKSLGLIL VVLICLFVLA
401: YGRSWGPMGW LVPSELFPLE TRSAGQSVVV CVNLFFTALI AQCFLVSLCH LKYGIFLLFA GLILGMGSFV YFLLPETKQV PIEEVYLLWR QHWLWKKYVE
501: DVDE
Arabidopsis Description
STP14Sugar transport protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.