Factsheet for PGSC0003DMT400030841

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g054270.2.1	Tomato	plasma membrane	97.14	97.14
PGSC0003DMT400034820	Potato	plasma membrane	84.46	84.8
PGSC0003DMT400034821	Potato	plasma membrane	73.01	76.12
VIT_13s0019g01480.t01	Wine grape	plasma membrane	69.94	68.95
VIT_13s0019g01500.t01	Wine grape	plasma membrane	65.44	67.94
VIT_09s0018g02060.t01	Wine grape	plasma membrane	70.14	67.79
VIT_05s0020g03100.t01	Wine grape	plasma membrane	64.83	66.74
GSMUA_Achr9P11150_001	Banana	plasma membrane	67.48	64.83
GSMUA_Achr11P...	Banana	plasma membrane	66.46	63.98
EER98187	Sorghum	plasma membrane	63.19	60.35
TraesCS1D01G343200.1	Wheat	plasma membrane	62.78	60.08
TraesCS1A01G341100.1	Wheat	plasma membrane	62.37	59.69
TraesCS1B01G353800.1	Wheat	plasma membrane	62.17	59.49
Zm00001d019138_P001	Maize	plasma membrane	62.17	59.26
GSMUA_Achr11P...	Banana	plasma membrane	64.21	57.61
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	62.37	55.35
PGSC0003DMT400081426	Potato	mitochondrion	58.9	55.07
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	51.53	49.8
PGSC0003DMT400064529	Potato	plasma membrane	51.12	48.83
PGSC0003DMT400064478	Potato	plasma membrane	50.92	48.63
PGSC0003DMT400012931	Potato	plasma membrane	51.33	47.9
PGSC0003DMT400048280	Potato	plasma membrane	49.9	47.56
PGSC0003DMT400057709	Potato	plasma membrane	49.9	46.65
PGSC0003DMT400000990	Potato	plasma membrane	43.56	46.1
PGSC0003DMT400048537	Potato	plasma membrane	47.85	45.97
PGSC0003DMT400070558	Potato	plasma membrane	48.06	45.54
PGSC0003DMT400016373	Potato	plasma membrane	47.03	44.75
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	46.42	44.6
PGSC0003DMT400094737	Potato	golgi, plasma membrane, vacuole	47.65	44.13

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102601634	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M1AUV4	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG400011815	PGSC:PGSC0003DMG400011815	EnsemblPlants:PGSC0003DMT400030841	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF77	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00029582D1	RefSeq:XP_006356676.1	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011815]

Coordinates

chr6:-:40610373..40612477

Molecular Weight (calculated)

53745.7 Da

IEP (calculated)

8.806

GRAVY (calculated)

0.643

Length

489 amino acids

Sequence
(BLAST)

001: MSTIQANNSK ITVYVVSCWI FAAFGGLMFG YDIGISGGVS GMDDFLIKFF PNVYERKLHA KENNYCKYDD QLLQLFTSSL YLSALVSSFF ASKACSALGR
101: RPTIFMASLF FIAGAVISAA SEHRWMLIVG RILFGVGVGF GNETVPLFLT EVAPIQLRGA VNIMFQLFVT IGIFIANLVN YATSNMHPNG WRVSLGLAAV
201: PALMLLVGCF VITDTPASLI ERGKDEQGKA ALKKVRGVDD VEVEFKEIVA ACEQAKAVKH PFRNLMKSAS VPPLVIAVFL QIFQQFTGIN AIMFYAPVLF
301: QTMGFKSDGA LLSAVITGLV NVGSTFVSIY AVDKVGRRKL LLQACCQMLI SQLAIGIILS FSLKETGTLD RTLATIVVIL VCTYVMSFAW SWGPLGWLIP
401: SETFPMETRT AGFAFAVSTN MLFTSIIAQA FLTMLCKMQA NIFFFFSGWI VVMGLFVVFL VPETKGVPID GMVDVWKSHP VWKRCFKNE

Best Arabidopsis Sequence Match ( AT5G26250.1 )
(BLAST)

001: MAVVISSNGN SKSFDAKMTV YVFICVIIAA VGGLIFGYDI GISGGVTAMD DFLKEFFPSV YERKKHAHEN NYCKYDNQFL QLFTSSLYLA ALVASFFASA
101: TCSKLGRRPT MQLASIFFLI GVGLAAGAVN IYMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PARLRGGLNI VFQLMVTIGI LIANIVNYFT SSIHPYGWRI
201: ALGGAGIPAL ILLFGSLLIC ETPTSLIERN KTKEGKETLK KIRGVEDVDE EYESIVHACD IARQVKDPYT KLMKPASRPP FVIGMLLQFF QQFTGINAIM
301: FYAPVLFQTV GFGNDAALLS AVVTGTINVL STFVGIFLVD KTGRRFLLLQ SSVHMLICQL VIGIILAKDL DVTGTLARPQ ALVVVIFVCV YVMGFAWSWG
401: PLGWLIPSET FPLETRTEGF ALAVSCNMFF TFVIAQAFLS MLCAMKSGIF FFFSGWIVVM GLFALFFVPE TKGVSIDDMR DSVWKLHWYW KRFMLEEDEH
501: DVEKRTD

Arabidopsis Description

STP8Sugar transport protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SBA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.