Factsheet for VIT_13s0019g01480.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 6
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g02060.t01	Wine grape	plasma membrane	99.19	97.23
VIT_13s0019g01500.t01	Wine grape	plasma membrane	91.73	96.6
VIT_05s0020g03100.t01	Wine grape	plasma membrane	74.19	77.47
Solyc03g005140.1.1	Tomato	plasma membrane	68.75	70.02
PGSC0003DMT400030841	Potato	plasma membrane	68.95	69.94
GSMUA_Achr11P...	Banana	plasma membrane	71.37	69.69
PGSC0003DMT400034820	Potato	plasma membrane	68.35	69.61
Solyc06g054270.2.1	Tomato	plasma membrane	68.35	69.33
GSMUA_Achr9P11150_001	Banana	plasma membrane	70.97	69.16
Solyc01g010530.1.1	Tomato	plasma membrane	67.34	68.3
PGSC0003DMT400034821	Potato	plasma membrane	62.1	65.67
Solyc03g005150.2.1	Tomato	plasma membrane	63.31	64.48
EER98187	Sorghum	plasma membrane	65.32	63.28
Zm00001d019138_P001	Maize	plasma membrane	64.92	62.77
TraesCS1D01G343200.1	Wheat	plasma membrane	64.52	62.62
GSMUA_Achr11P...	Banana	plasma membrane	68.75	62.57
TraesCS1A01G341100.1	Wheat	plasma membrane	64.11	62.23
TraesCS1B01G353800.1	Wheat	plasma membrane	63.91	62.04
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	63.91	57.53
VIT_05s0020g03140.t01	Wine grape	plasma membrane	60.08	55.6
VIT_00s0181g00010.t01	Wine grape	plasma membrane	51.21	48.94
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	49.8	48.62
VIT_11s0149g00050.t01	Wine grape	plasma membrane	51.41	48.48
VIT_14s0083g00020.t01	Wine grape	plasma membrane	47.18	48.45
VIT_11s0016g03400.t01	Wine grape	plasma membrane	49.19	47.66
VIT_18s0001g05570.t01	Wine grape	plasma membrane	46.57	46.2
VIT_14s0083g00040.t01	Wine grape	plasma membrane	49.6	45.98
VIT_14s0083g00030.t01	Wine grape	plasma membrane	47.58	44.95

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EMBL:AM474454	ProteinID:CAN83671	ProteinID:CAN83671.1	ProteinID:CCB44578
ProteinID:CCB44578.1	UniProt:F6GX92	EMBL:FN594963	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351
GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600
GO:GO:1904659	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850	PFscan:PS51257	PANTHER:PTHR23500
PANTHER:PTHR23500:SF77	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI0002108375	ArrayExpress:VIT_13s0019g01480	EnsemblPlantsGene:VIT_13s0019g01480	EnsemblPlants:VIT_13s0019g01480.t01	SEG:seg	:

Description

No Description!

Coordinates

chr13_random:+:3039331..3042143

Molecular Weight (calculated)

54918.3 Da

IEP (calculated)

8.934

GRAVY (calculated)

0.632

Length

496 amino acids

Sequence
(BLAST)

001: MTKIEKVGSF ESKITVYVVV CWVLAACGGL MFGYDIGISG GVTAMDDFLI KFFPAVYQRK LRAKEDNYCK YDNQYLQLFT SSLYLAALIS SFAASKMCSK
101: LGRKPTIFVA SAFFLCGSLL SAAAQRIWMI ILARVLLGVG VGFGNEAVPL FLSEIAPVQH RGAVNILFQL FITIGILFAN LVNYGASKIH PWGWRLSLGL
201: ASLPAAFLFV GSVVIIETPA SLVERNQESQ GLSTLKKIRG VEDVDAEFEH IKMACEAARE VKDPFKTLMK RSSMPPLIIG VMMQVFQQFT GINAIMFYAP
301: VLFQTVGFKN DASLLSSVIT GLVNVFSTLV SIYGVDRVGR RKLLLQACVQ MFISQTAIGA ILLVHLKGSN SLDEGLAGLV VVLVCLFVMS FAWSWGPLGW
401: LIPSETFPLE IRTSGFACAV SSNMLFTFII AQAFLSMMCH MRAFIFFFFA AWIVAMGLFV LFLLPETKNV PIDAMVERVW KQHPVWKRFM DDYDGK

Best Arabidopsis Sequence Match ( AT5G26250.1 )
(BLAST)

001: MAVVISSNGN SKSFDAKMTV YVFICVIIAA VGGLIFGYDI GISGGVTAMD DFLKEFFPSV YERKKHAHEN NYCKYDNQFL QLFTSSLYLA ALVASFFASA
101: TCSKLGRRPT MQLASIFFLI GVGLAAGAVN IYMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PARLRGGLNI VFQLMVTIGI LIANIVNYFT SSIHPYGWRI
201: ALGGAGIPAL ILLFGSLLIC ETPTSLIERN KTKEGKETLK KIRGVEDVDE EYESIVHACD IARQVKDPYT KLMKPASRPP FVIGMLLQFF QQFTGINAIM
301: FYAPVLFQTV GFGNDAALLS AVVTGTINVL STFVGIFLVD KTGRRFLLLQ SSVHMLICQL VIGIILAKDL DVTGTLARPQ ALVVVIFVCV YVMGFAWSWG
401: PLGWLIPSET FPLETRTEGF ALAVSCNMFF TFVIAQAFLS MLCAMKSGIF FFFSGWIVVM GLFALFFVPE TKGVSIDDMR DSVWKLHWYW KRFMLEEDEH
501: DVEKRTD

Arabidopsis Description

STP8Sugar transport protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SBA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.