Factsheet for VIT_05s0020g03100.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g01500.t01	Wine grape	plasma membrane	76.21	76.86
VIT_13s0019g01480.t01	Wine grape	plasma membrane	77.47	74.19
VIT_09s0018g02060.t01	Wine grape	plasma membrane	78.11	73.32
PGSC0003DMT400034820	Potato	plasma membrane	67.58	65.91
Solyc03g005140.1.1	Tomato	plasma membrane	67.58	65.91
GSMUA_Achr11P...	Banana	plasma membrane	70.32	65.75
Solyc06g054270.2.1	Tomato	plasma membrane	67.16	65.24
Solyc01g010530.1.1	Tomato	plasma membrane	66.95	65.03
PGSC0003DMT400030841	Potato	plasma membrane	66.74	64.83
GSMUA_Achr9P11150_001	Banana	plasma membrane	69.26	64.64
EER98187	Sorghum	plasma membrane	67.16	62.3
TraesCS1A01G341100.1	Wheat	plasma membrane	66.74	62.04
Solyc03g005150.2.1	Tomato	plasma membrane	63.58	62.01
TraesCS1D01G343200.1	Wheat	plasma membrane	66.53	61.84
TraesCS1B01G353800.1	Wheat	plasma membrane	66.53	61.84
PGSC0003DMT400034821	Potato	plasma membrane	60.84	61.62
Zm00001d019138_P001	Maize	plasma membrane	66.32	61.4
GSMUA_Achr11P...	Banana	plasma membrane	68.84	60.0
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	66.53	57.35
VIT_05s0020g03140.t01	Wine grape	plasma membrane	62.11	55.04
VIT_14s0083g00020.t01	Wine grape	plasma membrane	49.89	49.07
VIT_00s0181g00010.t01	Wine grape	plasma membrane	53.26	48.75
VIT_11s0149g00050.t01	Wine grape	plasma membrane	53.89	48.67
VIT_16s0013g01950.t01	Wine grape	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	51.16	47.83
VIT_11s0016g03400.t01	Wine grape	plasma membrane	51.16	47.46
VIT_14s0083g00040.t01	Wine grape	plasma membrane	50.74	45.05
VIT_14s0083g00030.t01	Wine grape	plasma membrane	49.47	44.76
VIT_18s0001g05570.t01	Wine grape	plasma membrane	45.89	43.6

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100266554	wikigene:100266554	MapMan:24.2.2.1.6	ProteinID:ADP37134	ProteinID:ADP37134.1
EMBL:AM470879	ProteinID:CAN61764	ProteinID:CAN61764.1	ProteinID:CBI26224	ProteinID:CBI26224.3	UniProt:D7T6V3
EMBL:FN595749	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	EMBL:HQ323269
InterPro:IPR020846	EntrezGene:LOC100266554	wikigene:LOC100266554	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf
PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF77
SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001BE2CB7
ArrayExpress:VIT_05s0020g03100	EnsemblPlantsGene:VIT_05s0020g03100	EnsemblPlants:VIT_05s0020g03100.t01	RefSeq:XP_002277946	RefSeq:XP_002277946.1	SEG:seg

Description

No Description!

Coordinates

chr5:+:4852045..4853925

Molecular Weight (calculated)

52725.7 Da

IEP (calculated)

9.788

GRAVY (calculated)

0.491

Length

475 amino acids

Sequence
(BLAST)

001: MFGYDIGISG GVTGMDGFLI KFFPIVYKRK LRAKEDNYCK YDDQYLQLFT SSLYLAALIS SFPASKVCTK FGRKPTILVA SVFFLLGSGL SAGAHQMWML
101: ILGRISLGCG VGFGNEAVPL FLSEIAPVEY RGAVNILFQL FITIGILIAN LVNYGTSKVH PWGWRLSLGL AAIPATGLFI GSLIIPETPT SLVERNHEEK
201: GRKTLKKIRG VDNVDPEFEQ IKVACEIARR VKHPYRSLMK LSSMPPLIIG IMMQVFQQFT GINAIMFYAP ILFQTVGFKN DASLLSAIIT GLVNVFCTVV
301: SIYAVDKVGR RLLLLQACVQ MFVSQTAIGG ILLAKLNATN SLPKGQAWVV VVLVCVYVSS FAWSWGPLGW LIPSETFPLE TRTAGFAFAV SSNMLFTFVI
401: AQSFLSMMCH MRAGIFLFFA GWIVIMGIFV LFLLPETKGV PIDEMKERVW KKHPIWKKFM SDDADDRAKK TIEMS

Best Arabidopsis Sequence Match ( AT5G26250.1 )
(BLAST)

001: MAVVISSNGN SKSFDAKMTV YVFICVIIAA VGGLIFGYDI GISGGVTAMD DFLKEFFPSV YERKKHAHEN NYCKYDNQFL QLFTSSLYLA ALVASFFASA
101: TCSKLGRRPT MQLASIFFLI GVGLAAGAVN IYMLIIGRIL LGFGVGFGNQ AVPLFLSEIA PARLRGGLNI VFQLMVTIGI LIANIVNYFT SSIHPYGWRI
201: ALGGAGIPAL ILLFGSLLIC ETPTSLIERN KTKEGKETLK KIRGVEDVDE EYESIVHACD IARQVKDPYT KLMKPASRPP FVIGMLLQFF QQFTGINAIM
301: FYAPVLFQTV GFGNDAALLS AVVTGTINVL STFVGIFLVD KTGRRFLLLQ SSVHMLICQL VIGIILAKDL DVTGTLARPQ ALVVVIFVCV YVMGFAWSWG
401: PLGWLIPSET FPLETRTEGF ALAVSCNMFF TFVIAQAFLS MLCAMKSGIF FFFSGWIVVM GLFALFFVPE TKGVSIDDMR DSVWKLHWYW KRFMLEEDEH
501: DVEKRTD

Arabidopsis Description

STP8Sugar transport protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SBA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.