Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81689 | Sorghum | extracellular, plasma membrane, vacuole | 89.06 | 89.41 |
| TraesCS2D01G318500.1 | Wheat | vacuole | 86.52 | 87.38 |
| Zm00001d003468_P001 | Maize | peroxisome, plasma membrane, vacuole | 64.06 | 87.23 |
| TraesCS2A01G340900.1 | Wheat | peroxisome, plasma membrane, vacuole | 86.33 | 87.18 |
| TraesCS2B01G338700.1 | Wheat | vacuole | 86.52 | 81.89 |
| HORVU2Hr1G079700.3 | Barley | cytosol, peroxisome | 84.38 | 76.19 |
| GSMUA_Achr3P06440_001 | Banana | golgi, plasma membrane, vacuole | 61.33 | 61.69 |
| GSMUA_Achr3P06460_001 | Banana | peroxisome, plasma membrane, vacuole | 58.01 | 59.4 |
| Os04t0452700-01 | Rice | plasma membrane | 59.18 | 58.61 |
| Os04t0453200-01 | Rice | golgi, plasma membrane, vacuole | 56.64 | 57.2 |
| Os04t0452600-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 50.59 | 54.18 |
| VIT_18s0001g05570.t01 | Wine grape | plasma membrane | 51.76 | 53.0 |
| Os02t0573500-01 | Rice | plasma membrane | 54.49 | 52.94 |
| AT1G34580.1 | Thale cress | cytosol, golgi, plasma membrane | 51.17 | 51.78 |
| CDY66862 | Canola | plasma membrane | 50.78 | 51.38 |
| CDX91766 | Canola | golgi, plasma membrane, vacuole | 50.0 | 50.79 |
| PGSC0003DMT400016373 | Potato | plasma membrane | 50.78 | 50.58 |
| Os02t0574100-01 | Rice | cytosol, peroxisome, plasma membrane | 50.98 | 50.39 |
| KRH62357 | Soybean | plasma membrane | 49.8 | 50.3 |
| KRH53073 | Soybean | plasma membrane | 50.0 | 50.29 |
| Solyc04g074070.1.1 | Tomato | plasma membrane | 49.8 | 50.1 |
| KRH16713 | Soybean | plasma membrane | 49.41 | 49.8 |
| KRH62356 | Soybean | plasma membrane | 49.41 | 49.71 |
| Os04t0453300-00 | Rice | extracellular, golgi | 16.8 | 49.43 |
| Os09t0297300-00 | Rice | plasma membrane | 50.2 | 49.14 |
| KRH62355 | Soybean | plasma membrane | 48.05 | 48.43 |
| Os07t0106200-02 | Rice | plasma membrane | 48.63 | 48.07 |
| Os07t0559700-00 | Rice | plasma membrane | 49.22 | 47.55 |
| KRH16714 | Soybean | plasma membrane | 47.07 | 47.53 |
| KRH18902 | Soybean | plasma membrane | 46.48 | 47.41 |
| Os01t0567500-01 | Rice | plasma membrane | 47.07 | 46.98 |
| Os08t0178200-02 | Rice | golgi, plasma membrane, plastid, vacuole | 46.88 | 46.24 |
| Os09t0416200-01 | Rice | plasma membrane | 45.9 | 45.99 |
| Os01t0567600-00 | Rice | plasma membrane | 45.9 | 45.9 |
| Os03t0101300-02 | Rice | plasma membrane | 46.29 | 45.66 |
| Bra036755.1-P | Field mustard | plasma membrane | 50.2 | 45.57 |
| Os03t0594400-01 | Rice | plasma membrane | 46.29 | 45.4 |
| Os10t0561300-01 | Rice | plasma membrane | 45.31 | 44.79 |
| Os03t0218400-01 | Rice | plasma membrane | 44.92 | 44.66 |
| Os09t0268300-02 | Rice | plasma membrane | 43.36 | 43.44 |
| Os11t0594000-01 | Rice | cytosol, mitochondrion, plasma membrane, vacuole | 43.95 | 43.1 |
| Os02t0160400-01 | Rice | plasma membrane | 39.45 | 38.85 |
| Os03t0101500-01 | Rice | cytosol | 0.59 | 1.16 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.6 | EntrezGene:4336015 | ProteinID:BAF14871.1 | ProteinID:BAS89484.1 | ProteinID:EEE61103.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005351 | GO:GO:0005355 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0046323 | GO:GO:0055085 |
| GO:GO:1902600 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os04g0453400 |
| EnsemblPlants:Os04t0453400-02 | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | ScanProsite:PS00217 | PFscan:PS50850 |
| PANTHER:PTHR23500 | PANTHER:PTHR23500:SF2 | UniProt:Q0JCR6 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TIGRFAMs:TIGR00879 | TMHMM:TMhelix | UniParc:UPI0000DD90E8 | RefSeq:XP_015637243.1 | SEG:seg | : |
Description
Similar to H0505F09.6 protein. (Os04t0453400-01);Similar to Monosaccharide transporter 1. (Os04t0453400-02)
Coordinates
chr4:-:22628203..22633275
Molecular Weight (calculated)
54623.3 Da
IEP (calculated)
9.477
GRAVY (calculated)
0.589
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGSLLNSG GMADYGGGGG SGGGLTFPVV VTCLMAASGG LIFGYDIGIS GGVSEMESFL EKFFPGLLKG TAHASKDVYC IYNSQALTAF TSSLYAFGMV
101: GTLVASRVTR RTGRQAVMLI GGSMFLVGAL VNAAAVNIAM LIIGRMLLGL GLGFSGQATP VYLAEMSPPR WRGGFISGFP LFISVGYLIA NLINYGTSRI
201: PVWGWRLSLG LAAFPAAVMV AGAAFIPDTP SSLVLRGKHD LARAALQRVR GKGVDVDAEF NDILAAVEHD RRNDEGAFRR ILRREYRPYL VMAIAFPVFL
301: NLTGVAVTAF FSPILFRTVG FESDAALMGA VILGLMNIFG IVGSGFAMDR YGRRLLFMIG GALMFTCQVA MASIVGSQLG HGSKMAKGYA VTVLVMTCAF
401: SASFSWSWGA LYWAIPGEIY PVEVRSAGQG VAVALNLGLN FVQAQCFLAM LCCFKYGTFL FYASWLVVMT AFAVAFVPET KGVPLESMGH VFARHWYWGR
501: FVKDHKFGDV ST
101: GTLVASRVTR RTGRQAVMLI GGSMFLVGAL VNAAAVNIAM LIIGRMLLGL GLGFSGQATP VYLAEMSPPR WRGGFISGFP LFISVGYLIA NLINYGTSRI
201: PVWGWRLSLG LAAFPAAVMV AGAAFIPDTP SSLVLRGKHD LARAALQRVR GKGVDVDAEF NDILAAVEHD RRNDEGAFRR ILRREYRPYL VMAIAFPVFL
301: NLTGVAVTAF FSPILFRTVG FESDAALMGA VILGLMNIFG IVGSGFAMDR YGRRLLFMIG GALMFTCQVA MASIVGSQLG HGSKMAKGYA VTVLVMTCAF
401: SASFSWSWGA LYWAIPGEIY PVEVRSAGQG VAVALNLGLN FVQAQCFLAM LCCFKYGTFL FYASWLVVMT AFAVAFVPET KGVPLESMGH VFARHWYWGR
501: FVKDHKFGDV ST
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.