Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0637200-01 | Rice | cytosol, extracellular, mitochondrion | 84.4 | 83.64 |
| TraesCS6D01G339100.1 | Wheat | extracellular, golgi | 97.55 | 68.9 |
| TraesCS6B01G389100.1 | Wheat | extracellular | 96.64 | 68.25 |
| HORVU6Hr1G084860.2 | Barley | extracellular, mitochondrion | 96.02 | 62.8 |
| KXG24135 | Sorghum | extracellular, golgi | 80.43 | 53.89 |
| TraesCS5A01G461300.1 | Wheat | extracellular | 74.01 | 52.49 |
| TraesCS5A01G507200.1 | Wheat | extracellular | 71.25 | 51.21 |
| TraesCS5A01G507000.1 | Wheat | extracellular | 71.25 | 51.21 |
| TraesCS5A01G507100.1 | Wheat | extracellular | 70.95 | 50.99 |
| TraesCS3A01G320100.2 | Wheat | extracellular, plasma membrane, vacuole | 71.25 | 50.0 |
| TraesCS7A01G517900.1 | Wheat | unclear | 59.63 | 40.88 |
| TraesCS5A01G129200.1 | Wheat | cytosol, extracellular, plastid | 40.98 | 31.24 |
| TraesCS5A01G129100.1 | Wheat | extracellular | 41.59 | 31.19 |
| TraesCS6A01G115100.1 | Wheat | extracellular | 39.14 | 28.19 |
| TraesCS2A01G294200.1 | Wheat | extracellular | 39.45 | 27.92 |
| TraesCS2A01G506000.2 | Wheat | plastid | 39.76 | 23.85 |
| TraesCS3A01G163900.1 | Wheat | extracellular | 37.61 | 22.82 |
| TraesCS5A01G329200.3 | Wheat | extracellular | 35.78 | 21.12 |
| TraesCS5A01G182300.1 | Wheat | extracellular, golgi, mitochondrion, plastid, vacuole | 37.0 | 19.93 |
| TraesCS5A01G129000.1 | Wheat | extracellular | 16.82 | 19.71 |
| TraesCS4A01G400700.1 | Wheat | mitochondrion | 27.52 | 19.52 |
| TraesCS5A01G286100.2 | Wheat | extracellular, mitochondrion | 27.52 | 15.23 |
| TraesCS7A01G260000.1 | Wheat | extracellular | 27.83 | 14.77 |
| TraesCS4A01G400600.1 | Wheat | extracellular, plasma membrane, vacuole | 27.52 | 14.52 |
| TraesCS5A01G082400.1 | Wheat | plastid | 26.61 | 14.26 |
| TraesCS7A01G101900.1 | Wheat | extracellular, plasma membrane, vacuole | 26.91 | 14.19 |
| TraesCS4A01G057700.2 | Wheat | extracellular | 27.83 | 14.15 |
| TraesCS1A01G394600.1 | Wheat | extracellular, vacuole | 26.61 | 14.03 |
| TraesCS3A01G329700.1 | Wheat | extracellular | 25.99 | 13.45 |
| TraesCS5A01G442400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 26.61 | 13.36 |
| TraesCS5A01G285900.1 | Wheat | extracellular | 25.08 | 13.08 |
| TraesCS2A01G262000.1 | Wheat | extracellular, plasma membrane, vacuole | 25.99 | 13.04 |
| TraesCS5A01G076900.1 | Wheat | extracellular, golgi, vacuole | 26.61 | 12.79 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G357100.1 | EnsemblPlantsGene:TraesCS6A01G357100 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:Purple_acid_PPase_C_dom | PANTHER:PTHR22953 | PANTHER:PTHR22953:SF86 |
| PFAM:PF00149 | PFAM:PF14008 | SUPFAM:SSF56300 | TIGR:cd00839 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6A:+:587773737..587774808
Molecular Weight (calculated)
37654.6 Da
IEP (calculated)
6.973
GRAVY (calculated)
-0.658
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGHTVRTF WFTTPPKPGP DVPFRLGLIG DLGQTSDSNS RLTHYEATGG DAVLFMGDLS YADKHPLHDN NRWDTWGRFS ERSVAYQPWI WVTGNHEVDY
101: APELGETAPF KPFSHRYSTP HQSSGSPEPY WYSVKLASAH IIILSSYSAF GKYTPQYKWL EAELKRVNRS ETPWLIVASH SPWYNSYNFH YMEGEPMRVQ
201: FEQWAVDARV DLVFAGHVHA YERSHRVSNI KYNITDGRCK PVRDRRAPVY MTIGDGGNIE GLADSMTEPQ PSYSAFREAS FGHAVLDIKN RTHAYYAWYR
301: NADGVKVDAD TVWFTNRYYM PNHDDSR
101: APELGETAPF KPFSHRYSTP HQSSGSPEPY WYSVKLASAH IIILSSYSAF GKYTPQYKWL EAELKRVNRS ETPWLIVASH SPWYNSYNFH YMEGEPMRVQ
201: FEQWAVDARV DLVFAGHVHA YERSHRVSNI KYNITDGRCK PVRDRRAPVY MTIGDGGNIE GLADSMTEPQ PSYSAFREAS FGHAVLDIKN RTHAYYAWYR
301: NADGVKVDAD TVWFTNRYYM PNHDDSR
001: MKNLVIFAFL FLSITTVING GITSKFVRQA LPSIEMSLDT FPSPGGYNTP EQVHLTQGDH DGRGMIVSWV TPLNLAGSNV VTYWIATNGS DVKPAKKRAH
101: ASTKSYRFYD YSSGFLHHAT IKGLEYDTKY IYEVGTDKSV RQFSFTTPPK IGPDVPYTFG IIGDLGQTYA SNETLYHYMS NPKGQAVLFA GDLSYADDHP
201: NHDQRKWDTW GRFMEPCAAY QPFIFAAGNH EIDFVPNIGE PHAFKPYTHR YPNAYKASQS TSPLWYSVRR ASAHIIVLSS YSAYGKYTPQ YIWLEQELKN
301: VNREETPWLI VIVHSPWYNS NNYHYMEGES MRVMFESWLV NSKVDLVLSG HVHAYERSER ISNIKYNITN GLSSPVKDPN APIYITIGDG GNIEGIANSF
401: VDPQPSYSAY REASFGHAVL EIMNRTHAQY TWHRNQDNEP VAADSIMLHN RHFFPVEEIV SSNIRA
101: ASTKSYRFYD YSSGFLHHAT IKGLEYDTKY IYEVGTDKSV RQFSFTTPPK IGPDVPYTFG IIGDLGQTYA SNETLYHYMS NPKGQAVLFA GDLSYADDHP
201: NHDQRKWDTW GRFMEPCAAY QPFIFAAGNH EIDFVPNIGE PHAFKPYTHR YPNAYKASQS TSPLWYSVRR ASAHIIVLSS YSAYGKYTPQ YIWLEQELKN
301: VNREETPWLI VIVHSPWYNS NNYHYMEGES MRVMFESWLV NSKVDLVLSG HVHAYERSER ISNIKYNITN GLSSPVKDPN APIYITIGDG GNIEGIANSF
401: VDPQPSYSAY REASFGHAVL EIMNRTHAQY TWHRNQDNEP VAADSIMLHN RHFFPVEEIV SSNIRA
Arabidopsis Description
PAP6Purple acid phosphatase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C510]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.