Factsheet for TraesCS5A01G082400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

plastid: 22160430
unclear: 25769308

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13750.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G020400.5	Barley	extracellular	97.87	97.71
TraesCS5B01G083000.1	Wheat	endoplasmic reticulum, extracellular	97.7	97.55
TraesCS5B01G083700.1	Wheat	extracellular	98.36	94.64
EES16213	Sorghum	extracellular	90.33	89.01
Zm00001d030765_P003	Maize	extracellular	90.0	84.85
KXG36229	Sorghum	plastid	87.54	79.94
Zm00001d006374_P001	Maize	extracellular	86.07	79.43
TraesCS5A01G076900.1	Wheat	extracellular, golgi, vacuole	87.87	78.82
PGSC0003DMT400023440	Potato	extracellular	70.33	70.21
KRG99244	Soybean	extracellular	70.82	70.13
KRH45750	Soybean	vacuole	70.0	69.32
Solyc05g012260.2.1	Tomato	nucleus	68.03	68.48
PGSC0003DMT400072925	Potato	extracellular	68.36	68.25
CDY16105	Canola	extracellular	68.03	67.48
AT1G13750.1	Thale cress	extracellular, plasma membrane, vacuole	67.7	67.37
CDY33806	Canola	extracellular, golgi, vacuole	68.52	67.31
Bra026890.1-P	Field mustard	extracellular, golgi	68.52	67.31
TraesCS4A01G057700.2	Wheat	extracellular	70.82	67.19
KRH70903	Soybean	endoplasmic reticulum, extracellular, golgi, plastid	68.85	65.52
TraesCS4A01G400700.1	Wheat	mitochondrion	49.02	64.86
VIT_01s0011g00470.t01	Wine grape	cytosol, extracellular, plasma membrane	71.15	64.58
CDY36408	Canola	extracellular, plasma membrane	55.9	64.1
CDX98126	Canola	extracellular, plasma membrane	64.92	63.97
Bra019705.1-P	Field mustard	extracellular, plasma membrane	64.75	63.71
TraesCS1A01G394600.1	Wheat	extracellular, vacuole	62.46	61.45
TraesCS7A01G260000.1	Wheat	extracellular	61.48	60.88
TraesCS4A01G400600.1	Wheat	extracellular, plasma membrane, vacuole	60.82	59.84
TraesCS7A01G101900.1	Wheat	extracellular, plasma membrane, vacuole	60.33	59.35
TraesCS5A01G286100.2	Wheat	extracellular, mitochondrion	56.56	58.38
TraesCS5A01G285900.1	Wheat	extracellular	55.41	53.91
TraesCS3A01G329700.1	Wheat	extracellular	32.62	31.49
TraesCS5A01G442400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	28.69	26.88
TraesCS6A01G357100.1	Wheat	cytosol	14.26	26.61
TraesCS2A01G262000.1	Wheat	extracellular, plasma membrane, vacuole	28.2	26.38
TraesCS5A01G129100.1	Wheat	extracellular	18.85	26.38
TraesCS5A01G129200.1	Wheat	cytosol, extracellular, plastid	17.87	25.41
TraesCS5A01G507000.1	Wheat	extracellular	18.52	24.84
TraesCS5A01G507200.1	Wheat	extracellular	18.52	24.84
TraesCS3A01G320100.2	Wheat	extracellular, plasma membrane, vacuole	18.85	24.68
TraesCS5A01G507100.1	Wheat	extracellular	18.36	24.62
TraesCS6A01G115100.1	Wheat	extracellular	17.87	24.01
TraesCS7A01G517900.1	Wheat	unclear	18.52	23.69
TraesCS5A01G129000.1	Wheat	extracellular	10.82	23.66
TraesCS5A01G461300.1	Wheat	extracellular	17.54	23.21
TraesCS2A01G294200.1	Wheat	extracellular	17.38	22.94
TraesCS3A01G163900.1	Wheat	extracellular	18.36	20.78
TraesCS5A01G182300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	19.84	19.93
TraesCS5A01G329200.3	Wheat	extracellular	17.87	19.68
TraesCS2A01G506000.2	Wheat	plastid	17.54	19.63

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PFAM:PF16656	PFscan:PS51257	PANTHER:PTHR22953	PANTHER:PTHR22953:SF44
InterPro:Purple_acid_PPase_C_dom	InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS5A01G082400	EnsemblPlants:TraesCS5A01G082400.1	TIGR:cd00839	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:-:106747802..106751031

Molecular Weight (calculated)

68594.3 Da

IEP (calculated)

6.817

GRAVY (calculated)

-0.391

Length

610 amino acids

Sequence
(BLAST)

001: MRPWAWVAAV TWMAACSAAA AHGEQPLSMI AVERTTLAVD DAAHVKASPA VLGLEGQYSG WVEVEFFHPD PSGDDWIGVF SPANFSAAIC EPENKRQYPP
101: VLCTAPIKYQ FAKFKNDGYS KSGKGYLKLQ LINQREDFSF ALFSGGLLKP KLIAVSNKVT FVNPKAPVYP RLAQGKSWNE MTVTWTSGYD IKEAVPFVEW
201: GEKGGRRFLS PAGTLTFDRN SMCGAPARTV GWRHPGYIHT SYLKDLWPDS MYTYRLGHRL PNGTRVWSKS YSFKASPYPG QDSLQRVVIF GDMGKAEADG
301: SNEYNNFQPG SLNTTNQIIR DLENIDMVVH IGDICYANGY LSQWDQFTAQ IEPIASTVPY MVGSGNHERD WPGTGSFYGN LDSGGECGVP AQTVFYTPAE
401: NRAKFWYATD YGMFRFCIAH TEEDWRPGTE QYKFIEHCLS SVDRQKQPWL IFLAHRVLGY SSNSYYGFEG TFEEPMGREA LQELWQKYKV DLAFYGHVHN
501: YERTCPVYQS QCVVNASNHY SGPFQATTHV VVGGAGASLS DFITSKIQWS HFRDFDHGFG KLTAFNHSSL LFEYKKSRDG NVYDHFTISR DYRDVLACSV
601: DNCPRTSLAS

Best Arabidopsis Sequence Match ( AT1G13750.1 )
(BLAST)

001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS

Arabidopsis Description

PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.