Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G13750.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT1G13750.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT1G13750.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G082400.1 | Wheat | plastid | 94.64 | 98.36 |
| HORVU5Hr1G020400.5 | Barley | extracellular | 94.32 | 97.87 |
| TraesCS5B01G083000.1 | Wheat | endoplasmic reticulum, extracellular | 93.69 | 97.22 |
| EES16213 | Sorghum | extracellular | 86.44 | 88.53 |
| TraesCS5B01G082700.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 83.91 | 85.95 |
| TraesCS5B01G083600.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 83.6 | 85.62 |
| Zm00001d030765_P003 | Maize | extracellular | 85.96 | 84.23 |
| KXG36229 | Sorghum | plastid | 83.91 | 79.64 |
| Zm00001d006374_P001 | Maize | extracellular | 82.49 | 79.12 |
| PGSC0003DMT400023440 | Potato | extracellular | 67.82 | 70.38 |
| TraesCS4B01G247300.1 | Wheat | extracellular | 68.45 | 70.34 |
| KRG99244 | Soybean | extracellular | 68.14 | 70.13 |
| KRH45750 | Soybean | vacuole | 67.35 | 69.32 |
| Solyc05g012260.2.1 | Tomato | nucleus | 65.62 | 68.65 |
| PGSC0003DMT400072925 | Potato | extracellular | 66.09 | 68.58 |
| AT1G13750.1 | Thale cress | extracellular, plasma membrane, vacuole | 64.83 | 67.05 |
| CDY16105 | Canola | extracellular | 64.98 | 66.99 |
| Bra026890.1-P | Field mustard | extracellular, golgi | 65.46 | 66.83 |
| CDY33806 | Canola | extracellular, golgi, vacuole | 65.46 | 66.83 |
| KRH70903 | Soybean | endoplasmic reticulum, extracellular, golgi, plastid | 66.25 | 65.52 |
| VIT_01s0011g00470.t01 | Wine grape | cytosol, extracellular, plasma membrane | 68.14 | 64.29 |
| CDY36408 | Canola | extracellular, plasma membrane | 53.47 | 63.72 |
| CDX98126 | Canola | extracellular, plasma membrane | 62.15 | 63.65 |
| Bra019705.1-P | Field mustard | extracellular, plasma membrane | 61.99 | 63.39 |
| TraesCS1B01G422100.1 | Wheat | vacuole | 60.88 | 62.56 |
| TraesCS4B01G348600.1 | Wheat | extracellular, plasma membrane | 60.73 | 62.4 |
| TraesCS7B01G158000.1 | Wheat | cytosol, extracellular, mitochondrion | 57.1 | 62.09 |
| TraesCS5B01G285400.1 | Wheat | extracellular, golgi | 54.73 | 58.91 |
| TraesCS5B01G285300.1 | Wheat | cytosol | 34.86 | 54.57 |
| TraesCS5B01G285200.1 | Wheat | extracellular | 53.0 | 53.67 |
| TraesCS3B01G359800.1 | Wheat | extracellular, plasma membrane, vacuole | 31.86 | 31.96 |
| TraesCS5B01G127700.1 | Wheat | extracellular | 16.72 | 26.84 |
| TraesCS5B01G446500.1 | Wheat | extracellular | 27.44 | 26.77 |
| TraesCS2B01G573000.1 | Wheat | extracellular, nucleus, plasma membrane | 28.39 | 26.75 |
| TraesCS4B01G337500.1 | Wheat | cytosol | 16.4 | 26.74 |
| TraesCS2B01G280200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 26.97 | 26.27 |
| TraesCS6B01G389100.1 | Wheat | extracellular | 18.14 | 24.84 |
| TraesCS3B01G345800.1 | Wheat | extracellular, plasma membrane, vacuole | 18.14 | 24.68 |
| TraesCS2B01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 16.72 | 23.87 |
| TraesCS5B01G471500.1 | Wheat | extracellular | 17.19 | 23.64 |
| TraesCS7B01G434000.1 | Wheat | extracellular, plastid | 18.14 | 23.37 |
| TraesCS7B01G434100.1 | Wheat | unclear | 17.51 | 23.27 |
| TraesCS6B01G142700.1 | Wheat | extracellular, plasma membrane | 17.35 | 22.96 |
| TraesCS5B01G127800.1 | Wheat | mitochondrion | 17.67 | 22.27 |
| TraesCS3B01G202200.2 | Wheat | extracellular | 17.98 | 21.11 |
| TraesCS5B01G180300.1 | Wheat | extracellular, golgi, mitochondrion, plastid, vacuole | 18.93 | 19.87 |
| TraesCS2B01G534400.2 | Wheat | plastid | 16.56 | 19.48 |
| TraesCS5B01G329300.2 | Wheat | endoplasmic reticulum, extracellular, peroxisome | 17.19 | 18.73 |
Protein Annotations
| Gene3D:3.60.21.10 | MapMan:35.1 | InterPro:Calcineurin-like_PHP_ApaH | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003993 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR008963 | InterPro:IPR029052 |
| InterPro:Metallo-depent_PP-like | PFAM:PF00149 | PFAM:PF14008 | PFAM:PF16656 | PFscan:PS51257 | PANTHER:PTHR22953 |
| PANTHER:PTHR22953:SF44 | InterPro:Purple_acid_PPase_C_dom | InterPro:Purple_acid_Pase-like_N | InterPro:Purple_acid_Pase_N | SUPFAM:SSF49363 | SUPFAM:SSF56300 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS5B01G083700 | EnsemblPlants:TraesCS5B01G083700.1 | TIGR:cd00839 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:+:105767993..105771351
Molecular Weight (calculated)
68611.3 Da
IEP (calculated)
6.724
GRAVY (calculated)
-0.385
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPWAWVAAV TWMAACTAAA AHGEQPLSRI AVERTTLAVD DAAHVKASPA VLGLEGQDSG WVELDFFHPD PSGDDWIGVF SPANFSAAIC EPENKRQYPP
101: VLCTAPIKYQ FAKFKNDGYS KSGKGYLKLQ LINQREDFSF ALFSGGLLKP KLIAVSNKVT FLNPKAPVYP RLAQGKSWNE MTVTWTSGYD IKEAVPFVEW
201: GEKGGLRILS PAGTLTFDRN SMCGAPARTV GWRHPGYIHT SYLKDLWPDS MYTYRLGHRL PNGTRVWSKS YSFKASPYPG QDSLQRVVIF GDMGKAEADG
301: SNEYNNFQPG SLNTTNQIIR DLENIDMVVH IGDICYANGY LSQWDQFTAQ IEPIASTVPY MVGSGNHERD WPGTGSFYGN LDSGGECGVP AQTVFYTPAE
401: NRAKFWYATD YGMFRFCIAH TEEDWRPGTE QYKFIEHCLS SVDRQKQPWL IFLAHRVLGY SSNSYYGFEG TFEEPMGREA LQELWQKYKV DLAFYGHVHN
501: YERTCPVYQS QCVVNASNHY SGPFQATTHV VVGGAGASLS DFTTSKIQWS HFRDFDHGFG KLTAFNHSSL LFEYKKSRDG NVYDHFTISR DYRDVLACSV
601: DNCPRTSLAX XXXXXXXXXX XXXXXXXXXX XXTS
101: VLCTAPIKYQ FAKFKNDGYS KSGKGYLKLQ LINQREDFSF ALFSGGLLKP KLIAVSNKVT FLNPKAPVYP RLAQGKSWNE MTVTWTSGYD IKEAVPFVEW
201: GEKGGLRILS PAGTLTFDRN SMCGAPARTV GWRHPGYIHT SYLKDLWPDS MYTYRLGHRL PNGTRVWSKS YSFKASPYPG QDSLQRVVIF GDMGKAEADG
301: SNEYNNFQPG SLNTTNQIIR DLENIDMVVH IGDICYANGY LSQWDQFTAQ IEPIASTVPY MVGSGNHERD WPGTGSFYGN LDSGGECGVP AQTVFYTPAE
401: NRAKFWYATD YGMFRFCIAH TEEDWRPGTE QYKFIEHCLS SVDRQKQPWL IFLAHRVLGY SSNSYYGFEG TFEEPMGREA LQELWQKYKV DLAFYGHVHN
501: YERTCPVYQS QCVVNASNHY SGPFQATTHV VVGGAGASLS DFTTSKIQWS HFRDFDHGFG KLTAFNHSSL LFEYKKSRDG NVYDHFTISR DYRDVLACSV
601: DNCPRTSLAX XXXXXXXXXX XXXXXXXXXX XXTS
001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS
Arabidopsis Description
PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.