Factsheet for TraesCS5B01G083600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13750.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G082700.1	Wheat	endoplasmic reticulum, extracellular, golgi	98.22	98.22
TraesCS5A01G076900.1	Wheat	extracellular, golgi, vacuole	97.42	88.68
TraesCS5D01G090100.3	Wheat	plastid	95.15	88.31
TraesCS5B01G083000.1	Wheat	endoplasmic reticulum, extracellular	85.3	86.42
Os12t0576700-01	Rice	extracellular, golgi, vacuole	84.01	85.11
TraesCS5B01G083700.1	Wheat	extracellular	85.62	83.6
KRG99244	Soybean	extracellular	68.98	69.32
TraesCS4B01G247300.1	Wheat	extracellular	68.66	68.88
PGSC0003DMT400023440	Potato	extracellular	67.69	68.58
KRH45750	Soybean	vacuole	68.01	68.34
Solyc05g012260.2.1	Tomato	nucleus	66.56	67.99
PGSC0003DMT400072925	Potato	extracellular	67.04	67.92
AT1G13750.1	Thale cress	extracellular, plasma membrane, vacuole	66.24	66.88
CDY16105	Canola	extracellular	66.07	66.5
CDY33806	Canola	extracellular, golgi, vacuole	66.07	65.86
Bra026890.1-P	Field mustard	extracellular, golgi	66.07	65.86
KRH70903	Soybean	endoplasmic reticulum, extracellular, golgi, plastid	66.24	63.96
VIT_01s0011g00470.t01	Wine grape	cytosol, extracellular, plasma membrane	68.34	62.95
CDY36408	Canola	extracellular, plasma membrane	53.8	62.59
CDX98126	Canola	extracellular, plasma membrane	62.52	62.52
Bra019705.1-P	Field mustard	extracellular, plasma membrane	62.36	62.26
TraesCS1B01G422100.1	Wheat	vacuole	61.55	61.75
TraesCS4B01G348600.1	Wheat	extracellular, plasma membrane	61.23	61.43
TraesCS7B01G158000.1	Wheat	cytosol, extracellular, mitochondrion	57.84	61.41
TraesCS5B01G285400.1	Wheat	extracellular, golgi	55.41	58.23
TraesCS5B01G285300.1	Wheat	cytosol	34.73	53.09
TraesCS5B01G285200.1	Wheat	extracellular	53.31	52.72
TraesCS3B01G359800.1	Wheat	extracellular, plasma membrane, vacuole	32.96	32.28
TraesCS4B01G337500.1	Wheat	cytosol	16.64	26.48
TraesCS2B01G280200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	27.14	25.81
TraesCS2B01G573000.1	Wheat	extracellular, nucleus, plasma membrane	27.95	25.71
TraesCS5B01G127700.1	Wheat	extracellular	16.32	25.57
TraesCS5B01G446500.1	Wheat	extracellular	26.82	25.54
TraesCS3B01G345800.1	Wheat	extracellular, plasma membrane, vacuole	19.06	25.32
TraesCS6B01G389100.1	Wheat	extracellular	18.58	24.84
TraesCS5B01G471500.1	Wheat	extracellular	18.09	24.3
TraesCS7B01G434000.1	Wheat	extracellular, plastid	19.22	24.19
TraesCS7B01G434100.1	Wheat	unclear	18.58	24.11
TraesCS2B01G310500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.64	23.2
TraesCS5B01G127800.1	Wheat	mitochondrion	17.45	21.47
TraesCS6B01G142700.1	Wheat	extracellular, plasma membrane	16.48	21.29
TraesCS3B01G202200.2	Wheat	extracellular	18.26	20.93
TraesCS5B01G180300.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	18.74	19.21
TraesCS2B01G534400.2	Wheat	plastid	16.64	19.11
TraesCS5B01G329300.2	Wheat	endoplasmic reticulum, extracellular, peroxisome	17.77	18.9

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PFAM:PF16656	PANTHER:PTHR22953	PANTHER:PTHR22953:SF44	InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	SignalP:SignalP-TM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5B01G083600	EnsemblPlants:TraesCS5B01G083600.1	TIGR:cd00839	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:105710313..105713593

Molecular Weight (calculated)

69914.1 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.371

Length

619 amino acids

Sequence
(BLAST)

001: MVRNYRLLDE MRLWVVVIWL FVCAAALPGG EQPLSRIAVE KTTLAINDSV HVKASPLVLG LKGENSEWVE VEFFHPNPSD DDWIGVFSPA NFSDAICEPE
101: NERQQPPVLC TAPIKYQFAK FKNDGYNRSG KGNLKLQLIN QREDFSFALF SGGLMKPKLI AVSNMVTFAN PKSPVYPRLA QGKSWDEMTL TWTSGYDIKE
201: AVPFVKWGAK GGPQFLSPAG TLTFNRNSMC GAPARTVGWR HPGYIHTSFL KDLWPDSKYT YRLGHRLPNG THIWSKLYSF KASPYPGQDS LQQIVIFGDM
301: GKAEADGSNE FNDFQPGSLN TTNQIIRDLE NVDMVLHIGD ICYANGYLSQ WDQFTSQIES IASTVPYMIG SGNHERDWPG TGSFYGNLDS GGECGVPAQT
401: VFYTPAENRA KFWYATDYGM FRFCIANTEE DWRPGTEQYK FIEQCLSSVD RQKQPWLIFL AHRVLGYSSC TYYETEGTFE EPMGREALQE LWQKYKVDLA
501: FYGHVHNYER TCPVYQSQCV VDASDHYSGP FKATTHVVVG GGGASIADSA FTTSNIQWSH FRDFDFGFVK LTAFNHSSLL FEYKKSRDGN VYDHFTISRD
601: YRDVLACSID NCPRTTLAS

Best Arabidopsis Sequence Match ( AT1G13750.1 )
(BLAST)

001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS

Arabidopsis Description

PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.