Factsheet for TraesCS5D01G090100.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13750.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT1G13750.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G082700.1	Wheat	endoplasmic reticulum, extracellular, golgi	88.46	95.31
TraesCS5B01G083600.1	Wheat	endoplasmic reticulum, extracellular, golgi	88.31	95.15
TraesCS5A01G076900.1	Wheat	extracellular, golgi, vacuole	90.7	88.97
Os12t0576700-01	Rice	extracellular, golgi, vacuole	77.51	84.62
KRG99244	Soybean	extracellular	64.62	69.97
TraesCS4D01G246600.1	Wheat	golgi	63.42	69.46
KRH45750	Soybean	vacuole	63.87	69.16
PGSC0003DMT400023440	Potato	extracellular	63.12	68.9
Solyc05g012260.2.1	Tomato	nucleus	62.22	68.48
PGSC0003DMT400072925	Potato	extracellular	62.67	68.41
CDY16105	Canola	extracellular	62.37	67.64
CDY33806	Canola	extracellular, golgi, vacuole	62.37	66.99
Bra026890.1-P	Field mustard	extracellular, golgi	62.37	66.99
AT1G13750.1	Thale cress	extracellular, plasma membrane, vacuole	61.32	66.72
KRH70903	Soybean	endoplasmic reticulum, extracellular, golgi, plastid	61.17	63.65
CDY36408	Canola	extracellular, plasma membrane	50.22	62.97
VIT_01s0011g00470.t01	Wine grape	cytosol, extracellular, plasma membrane	63.42	62.95
TraesCS5D01G293500.1	Wheat	cytosol	37.78	62.53
CDX98126	Canola	extracellular, plasma membrane	58.02	62.52
Bra019705.1-P	Field mustard	extracellular, plasma membrane	57.87	62.26
TraesCS4D01G343000.1	Wheat	plastid	56.52	61.1
TraesCS1D01G401800.1	Wheat	extracellular, golgi, vacuole	56.52	60.71
TraesCS7D01G260900.1	Wheat	extracellular, plasma membrane, vacuole	54.72	59.35
TraesCS5D01G293700.1	Wheat	extracellular, golgi	52.17	59.18
TraesCS7D01G095900.1	Wheat	extracellular, plasma membrane, vacuole	54.12	58.13
TraesCS5D01G293600.1	Wheat	cytosol	27.14	56.21
TraesCS5D01G293400.1	Wheat	extracellular	50.37	53.67
TraesCS3D01G323100.1	Wheat	extracellular, plasma membrane, vacuole	29.84	31.69
TraesCS5D01G449800.1	Wheat	extracellular	19.49	27.25
TraesCS2D01G544400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	26.09	27.02
TraesCS2D01G262000.1	Wheat	extracellular, plasma membrane, vacuole	25.94	26.53
TraesCS5D01G136600.1	Wheat	extracellular	16.49	25.23
TraesCS3D01G312000.1	Wheat	extracellular, plasma membrane, vacuole	17.54	25.11
TraesCS6D01G339100.1	Wheat	extracellular, golgi	17.39	25.05
TraesCS4D01G332800.1	Wheat	extracellular	16.64	24.4
TraesCS5D01G136500.1	Wheat	extracellular	16.19	24.38
TraesCS5D01G474000.1	Wheat	extracellular	16.79	24.3
TraesCS4D01G333500.1	Wheat	extracellular	16.49	24.18
TraesCS7D01G507900.1	Wheat	extracellular	17.24	24.11
TraesCS2D01G291800.1	Wheat	endoplasmic reticulum	15.29	22.97
TraesCS6D01G103800.2	Wheat	extracellular	15.74	22.73
TraesCS5D01G136700.1	Wheat	mitochondrion	16.79	22.4
TraesCS7D01G012100.1	Wheat	cytosol	4.95	21.57
TraesCS5D01G335100.2	Wheat	extracellular	16.79	20.4
TraesCS3D01G177900.1	Wheat	cytosol	17.09	19.9
TraesCS2D01G506800.2	Wheat	plastid	15.89	19.67
TraesCS5D01G186700.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	17.54	19.44

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PFAM:PF16656	PANTHER:PTHR22953	PANTHER:PTHR22953:SF44	InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G090100
EnsemblPlants:TraesCS5D01G090100.3	TIGR:cd00839	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:97274773..97278588

Molecular Weight (calculated)

74987.2 Da

IEP (calculated)

5.741

GRAVY (calculated)

-0.278

Length

667 amino acids

Sequence
(BLAST)

001: MLLGTCSCAP WLRTTAVQDC ESATSTPRFL LSMFAWSYAS FCTSWSAVLP GSFRLLEEMR LWLVVIWLFV CAAALPGGEQ PLSRIAIENT TLAIDDSVHI
101: KASPLVLGLK GENSEWVEVE FFHPNPSDDD WIGVFSPANF SGAICDPENE WQQPPVLCTA PIKYQFAKFK NDGYNRSGKG NLKLQLINQR EDFSFALFSG
201: GLLKPKLIAV SNMVTFANPK APVYPRLAQG KSWDEMTITW TSGYNIKEAV PFVEWGAKGG PRFLSPAGTL SFNRNSMCGA PARTVGWRHP GYIHTSFLKD
301: LWPDSKYTYR LGHRLPNGTQ VWSKIYSFKA SPYPGQDSLQ QIVIFGDMGK AEADGSNEFN DFQPGSLNTT NQIIRDLKNI DMVLHIGDIC YANGYLSQWD
401: QFTSQIEPIA STVPYMIGSG NHERDWPGTG SFYGNLDSGG ECGVPAQTVF YTPAENRAKF WYATDYGMFR FCIANTEEDW RPGTEQYKFI EQCLSSVDRQ
501: KQPWLIFLAH RVLGYSSCTY YETEGTFEEP MGREALQELW QKYKVDLAFY GHVHNYERTC PVYQSQCVVD ASDHYSGPFK ATTHVVVGGA GASIADSAFT
601: TSNIQWSHFR DFDFGFVKLT AFNQSSLLFE YKKSHDGNVY DHFTISRDYR DVLACSIDNC PRTTLAS

Best Arabidopsis Sequence Match ( AT1G13750.1 )
(BLAST)

001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS

Arabidopsis Description

PAP1Probable inactive purple acid phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX4]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.