Factsheet for TraesCS4D01G343000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plastid: 22160430
plastid: 22736107
plastid: 28542341

msms PMID: 22736107 doi

AH Kamal, K Cho, DE Kim, N Uozumi, KY Chung, SY Lee, JS Choi, SW Cho, CS Shin, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk 361-763, Korea.

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms PMID: 28542341 doi

K Shi, J Gu, H Guo, L Zhao, Y Xie, H Xiong, J Li, S Zhao, X Song, L Liu

National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China., School of Life Sciences, Qingdao Agricultural University, Qingdao, Shandong, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G348600.1	Wheat	extracellular, plasma membrane	98.38	98.38
TraesCS7D01G260900.1	Wheat	extracellular, plasma membrane, vacuole	89.3	89.59
TraesCS1D01G401800.1	Wheat	extracellular, golgi, vacuole	86.71	86.15
HORVU4Hr1G085050.3	Barley	plastid	85.25	83.76
TraesCS7D01G095900.1	Wheat	extracellular, plasma membrane, vacuole	84.28	83.74
Os08t0531000-01	Rice	plastid	84.44	83.63
OQU80814	Sorghum	mitochondrion	83.47	79.48
Zm00001d031657_P001	Maize	extracellular	81.2	76.96
KXG25538	Sorghum	plastid	82.66	75.89
KRH54187	Soybean	nucleus	33.06	69.15
KRH54186	Soybean	endoplasmic reticulum	69.53	68.86
GSMUA_Achr11P...	Banana	extracellular, golgi	68.56	68.01
TraesCS5D01G293500.1	Wheat	cytosol	44.08	67.49
TraesCS5D01G293700.1	Wheat	extracellular, golgi	60.62	63.61
TraesCS4D01G246600.1	Wheat	golgi	60.78	61.58
TraesCS5D01G293600.1	Wheat	cytosol	30.15	57.76
TraesCS5D01G090100.3	Wheat	plastid	61.1	56.52
TraesCS5D01G293400.1	Wheat	extracellular	55.11	54.31
KRH63765	Soybean	mitochondrion	39.71	47.21
TraesCS3D01G323100.1	Wheat	extracellular, plasma membrane, vacuole	30.15	29.62
TraesCS5D01G449800.1	Wheat	extracellular	21.88	28.3
TraesCS2D01G544400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	27.39	26.24
TraesCS2D01G262000.1	Wheat	extracellular, plasma membrane, vacuole	26.58	25.15
TraesCS5D01G136500.1	Wheat	extracellular	17.99	25.06
TraesCS5D01G136600.1	Wheat	extracellular	17.67	25.0
TraesCS5D01G474000.1	Wheat	extracellular	18.48	24.73
TraesCS6D01G339100.1	Wheat	extracellular, golgi	18.48	24.62
TraesCS4D01G332800.1	Wheat	extracellular	17.99	24.4
TraesCS4D01G333500.1	Wheat	extracellular	17.83	24.18
TraesCS7D01G507900.1	Wheat	extracellular	18.15	23.48
TraesCS3D01G312000.1	Wheat	extracellular, plasma membrane, vacuole	17.34	22.96
TraesCS6D01G103800.2	Wheat	extracellular	17.02	22.73
TraesCS2D01G291800.1	Wheat	endoplasmic reticulum	15.56	21.62
TraesCS5D01G136700.1	Wheat	mitochondrion	16.53	20.4
TraesCS7D01G012100.1	Wheat	cytosol	5.02	20.26
TraesCS2D01G506800.2	Wheat	plastid	16.53	18.92
TraesCS5D01G335100.2	Wheat	extracellular	16.53	18.58
TraesCS3D01G177900.1	Wheat	cytosol	17.18	18.5
TraesCS5D01G186700.1	Wheat	extracellular, golgi, mitochondrion, plastid, vacuole	17.99	18.44

Protein Annotations

Gene3D:3.60.21.10	MapMan:35.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993
GO:GO:0005488	GO:GO:0016787	GO:GO:0046872	InterPro:IPR008963	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PFAM:PF16656	PANTHER:PTHR22953	PANTHER:PTHR22953:SF33	InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4D01G343000	EnsemblPlants:TraesCS4D01G343000.1	TIGR:cd00839	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:+:499302535..499305901

Molecular Weight (calculated)

69131.0 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.390

Length

617 amino acids

Sequence
(BLAST)

001: MGMAHVALAA VLAMAAAAAT VSASPALGIQ PLSKIAIHKA TVHLDLHRSS AYVRATPALL GNQDEDTVWV TVKYGWDNPT PDDWIAVFSP ADFISGTCPN
101: PERYPAEPLL CTAPIKYQYA NYSANYLKGG KGSIRLQLIN QRADFSFALF TGGLENPKLV SVSKKAVFKN PKAPVFPRLA QGKTHDEMTV TWTSGYDVGE
201: AYPFVEWGMV GAAGARTPAG TLTFNRGSMC GEPARTVGWR EPGFIHTAFM RNLWPNKEYF YKIGHELSDG TVVWAKPYTF RAPPTPGQNS LQRIIVFGDM
301: GKAERDGSNE FANYQPGSLN TTDRLIEDLD NYDIVFHIGD MPYANGYLSQ WDQFTAQVAP ISAKKPYMVA SGNHERDWPN TGGFFDVEDS GGECGVPAET
401: MYYYPAENRA NFWYKVDYGM FRFCVADSEH DWREGTPQYK FIEECLSTVD RKHQPWLIFT AHRVLGYSSN SWYADQGSFE EPEGRESLQK LWQKYRVDIA
501: YFGHVHNYER TCPLYQSQCV NNEKSHYSGT MNGTIFVVAG GGGSHLSEYT TAIPKWSIFR DHDYGFTKLT AFNHSSLLFE YMKSSDGKVY DSFTIHRDYR
601: DVLSCVHDSC FPTTLAS

Best Arabidopsis Sequence Match ( AT5G50400.2 )
(BLAST)

001: MLLSQIRSLL QTIGLESSHQ QNSNDKEIAP FICSAPVKYM YAKSSPDYMK TGNAVLKFML INQRADFSFA LFTGGLSNPT LVSVSNHVSF INPKAPVYPR
101: LALGKKWDEM TVTWTSGYNI GEAVPFVEWS RKGTRSRRSP AGTLTFTRNS MCGAPARTVG WRDPGFIHTA SLKDLWPNLK YTYRMGHELM NGSIVWSKNF
201: TFKSSPYPGQ DSLQRVIIFG DMGKGERDGS NEYNDYQPGS LNTTDQLIKD LKNIDIVFHI GDITYANGYI SQWDQFTAQV EPIASTVPYM VASGNHERDW
301: PDSGSFYGGK DSGGECGVPA ETMFDFPAEN KAKFWYSADY GMFRFCVADT EHDWREGSEQ YQFIERCLAS VDRRAQPWLI FIAHRVLGYS TNDWYGQEGS
401: FEEPMGRESL QKLWQKYKVD IAFYGHVHNY ERTCPIYQNQ CMDNEKSHYS GAFKGTIHVV VGGAGSHLSS FSSLKPKWSI FRDYDYGFVK LTAFDHSSLL
501: FEYKKSSNGA VHDSFTIFRE YRDVLACVRD SCEPTTLAS

Arabidopsis Description

PAP27Probable inactive purple acid phosphatase 27 [Source:UniProtKB/Swiss-Prot;Acc:Q5MAU8]
SUBAcon: [extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.