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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 3
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:extracellular
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH54187 Soybean nucleus 40.77 86.1
KRH57229 Soybean endoplasmic reticulum 77.37 77.24
GSMUA_Achr11P... Banana extracellular, golgi 73.52 73.63
TraesCS4A01G400700.1 Wheat mitochondrion 54.41 73.54
TraesCS7B01G158000.1 Wheat cytosol, extracellular, mitochondrion 66.13 70.67
Os08t0531000-01 Rice plastid 69.82 69.82
TraesCS4B01G348600.1 Wheat extracellular, plasma membrane 69.02 69.69
EES10559 Sorghum extracellular, plasma membrane 68.22 69.67
TraesCS4D01G343000.1 Wheat plastid 68.86 69.53
TraesCS1B01G422100.1 Wheat vacuole 68.54 69.21
TraesCS1A01G394600.1 Wheat extracellular, vacuole 68.38 68.71
TraesCS7A01G260000.1 Wheat extracellular 67.58 68.34
HORVU7Hr1G054090.6 Barley plasma membrane 68.22 68.33
TraesCS1D01G401800.1 Wheat extracellular, golgi, vacuole 68.06 68.28
KRG99244 Soybean extracellular 67.42 68.18
TraesCS7D01G260900.1 Wheat extracellular, plasma membrane, vacuole 67.26 68.13
HORVU1Hr1G087010.1 Barley extracellular, plasma membrane 68.06 68.06
KRH45750 Soybean vacuole 67.09 67.86
TraesCS5D01G293500.1 Wheat cytosol 43.82 67.74
TraesCS4A01G400600.1 Wheat extracellular, plasma membrane, vacuole 66.45 66.77
TraesCS7D01G095900.1 Wheat extracellular, plasma membrane, vacuole 65.97 66.18
TraesCS7A01G101900.1 Wheat extracellular, plasma membrane, vacuole 65.81 66.13
OQU80814 Sorghum mitochondrion 68.22 65.59
Os09t0506000-01 Rice extracellular, plasma membrane 66.13 65.4
Zm00001d031657_P001 Maize extracellular 68.22 65.28
KRH70903 Soybean endoplasmic reticulum, extracellular, golgi, plastid 66.61 64.74
TraesCS5D01G293700.1 Wheat extracellular, golgi 60.35 63.95
HORVU4Hr1G085050.3 Barley plastid 64.37 63.85
TraesCS5B01G285400.1 Wheat extracellular, golgi 59.39 62.82
KXG25538 Sorghum plastid 67.74 62.8
TraesCS5A01G286100.2 Wheat extracellular, mitochondrion 59.55 62.77
Zm00001d004075_P002 Maize extracellular, plasma membrane 62.76 61.77
KRH63765 Soybean mitochondrion 47.99 57.61
TraesCS5B01G285300.1 Wheat cytosol 37.24 57.28
TraesCS5D01G293600.1 Wheat cytosol 29.21 56.52
HORVU5Hr1G076250.1 Barley plastid 59.55 56.04
TraesCS5D01G293400.1 Wheat extracellular 54.41 54.15
TraesCS5B01G285200.1 Wheat extracellular 54.09 53.83
TraesCS5A01G285900.1 Wheat extracellular 53.93 53.59
HORVU5Hr1G076200.1 Barley extracellular, mitochondrion, peroxisome 54.09 52.82
Os09t0505900-00 Rice nucleus 44.46 42.35
KRH39860 Soybean vacuole 31.62 30.78
KRH23936 Soybean extracellular 31.3 29.59
KRH30846 Soybean cytosol 8.35 28.11
KRG89498 Soybean extracellular, plasma membrane 28.57 26.89
KRG96186 Soybean extracellular, golgi, vacuole 18.3 26.57
KRH67898 Soybean extracellular, golgi, vacuole 18.14 26.28
KRH32727 Soybean endoplasmic reticulum 17.01 25.18
KRH20185 Soybean nucleus 18.62 24.42
KRH73723 Soybean extracellular 17.5 24.01
KRH22146 Soybean extracellular, golgi 18.14 23.99
KRH27195 Soybean extracellular, plasma membrane, vacuole 17.98 23.88
KRH23858 Soybean extracellular 17.66 23.71
KRH14423 Soybean extracellular, golgi 17.5 23.7
KRH46137 Soybean extracellular, plastid, vacuole 17.82 23.67
KRH51771 Soybean cytosol 16.69 23.42
KRG96185 Soybean plastid 18.3 23.27
KRH51772 Soybean extracellular, golgi, vacuole 17.66 23.21
KRH67897 Soybean plastid 18.14 23.01
KRH39937 Soybean extracellular, vacuole 17.01 22.84
KRH31582 Soybean extracellular, mitochondrion, peroxisome, plastid 17.01 22.75
KRH46686 Soybean extracellular 19.9 22.67
KRH18439 Soybean extracellular 7.7 22.64
KRH03620 Soybean endoplasmic reticulum 17.98 21.88
KRG97331 Soybean extracellular 19.58 21.33
KRG93588 Soybean extracellular 19.26 20.44
Protein Annotations
Gene3D:3.60.21.10MapMan:35.1EMBL:ACUP02003508InterPro:Calcineurin-like_PHP_ApaHEnsemblPlantsGene:GLYMA_06G170300GO:GO:0003674
GO:GO:0003824GO:GO:0003993GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016311GO:GO:0016787GO:GO:0046872UniProt:I1KC33InterPro:IPR008963InterPro:IPR029052
EnsemblPlants:KRH54186ProteinID:KRH54186ProteinID:KRH54186.1InterPro:Metallo-depent_PP-likePFAM:PF00149PFAM:PF14008
PFAM:PF16656PANTHER:PTHR22953PANTHER:PTHR22953:SF24InterPro:Purple_acid_PPase_C_domInterPro:Purple_acid_Pase-like_NInterPro:Purple_acid_Pase_N
SUPFAM:SSF49363SUPFAM:SSF56300SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000233A8CBSEG:seg
Description
hypothetical protein
Coordinates
chr6:+:14266974..14275884
Molecular Weight (calculated)
70454.6 Da
IEP (calculated)
6.173
GRAVY (calculated)
-0.389
Length
623 amino acids
Sequence
(BLAST)
001: MEGFFGNCFN MILLMLCFTN LSIAFAQSHM NGFGEQPLAK IAIHKTVLAL HSSASIIAVP FVLGTKGEDT QWVTVELESP IPSVDDWVGV FSPANFNSAT
101: CPDTDGIGWV EEPYICTAPI KYKYANYSNR NYAKTGKAIL KFQLINQRAD FSFALFSGGL SDPRLVAISN SISFANPKAP VYPRLALGKS WDEMTVTWTS
201: GYDINEAVPF VEWGPKGGKK TRSHAGTLTF NRNSMCGEPA RTVGWRDPGF IHTSFLKELW PNFRYTYKLG HMLSNGSYVW SKKYSFKASP YPGQNSLQRV
301: IIFGDMGKAE RDGSNEYADY QPGSLNTTDQ LVKDLENYDI VFHIGDMPYA NGYISQWDQF TAQVQEISST VPYMIASGNH ERDWPNTGSF YDTPDSGGEC
401: GVPAETMYYF PAENRAKFWY KADYGLFRFC IADSEHDWRE GSEQYKFIEH CLATVDRKHQ PWLIFSAHRP LGYSSNLWYG MEGSFEEPMG RESLQKLWQK
501: YKVDIGFYGH VHNYERVCPI YQNQCVNEEK HHYSGTVNGT IHVVVGGGGS HLSDFTPSPP IWSLYRDVDY GFGKLTAFNH SYLLFEYKKS SDGEVYDSFT
601: ISRDYRDVLA CVHDGCEKTT LAT
Best Arabidopsis Sequence Match ( AT5G50400.1 )
(BLAST)
001: MARNFLLVLL WFIVQVSSSH ENGRGDQALS QIDIYAINLA QHHSAFIHVS PLVLGSQGQD TEWVNVVISN PEPSSDDWVG VFSPAKFDSS SCAPTDDKEI
101: APFICSAPVK YMYAKSSPDY MKTGNAVLKF MLINQRADFS FALFTGGLSN PTLVSVSNHV SFINPKAPVY PRLALGKKWD EMTVTWTSGY NIGEAVPFVE
201: WSRKGTRSRR SPAGTLTFTR NSMCGAPART VGWRDPGFIH TASLKDLWPN LKYTYRMGHE LMNGSIVWSK NFTFKSSPYP GQDSLQRVII FGDMGKGERD
301: GSNEYNDYQP GSLNTTDQLI KDLKNIDIVF HIGDITYANG YISQWDQFTA QVEPIASTVP YMVASGNHER DWPDSGSFYG GKDSGGECGV PAETMFDFPA
401: ENKAKFWYSA DYGMFRFCVA DTEHDWREGS EQYQFIERCL ASVDRRAQPW LIFIAHRVLG YSTNDWYGQE GSFEEPMGRE SLQKLWQKYK VDIAFYGHVH
501: NYERTCPIYQ NQCMDNEKSH YSGAFKGTIH VVVGGAGSHL SSFSSLKPKW SIFRDYDYGF VKLTAFDHSS LLFEYKKSSN GAVHDSFTIF REYRDVLACV
601: RDSCEPTTLA S
Arabidopsis Description
PAP27Probable inactive purple acid phosphatase 27 [Source:UniProtKB/Swiss-Prot;Acc:Q5MAU8]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.