CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03620	Soybean	endoplasmic reticulum	79.79	74.02
AT5G34850.1	Thale cress	extracellular	69.05	69.05
CDY12397	Canola	extracellular	68.84	68.84
Bra038946.1-P	Field mustard	extracellular	68.84	68.12
Solyc12g009800.1.1	Tomato	extracellular	68.21	67.92
PGSC0003DMT400020276	Potato	extracellular	68.21	67.92
CDY47560	Canola	extracellular	68.63	67.92
Solyc07g007670.2.1	Tomato	extracellular	67.79	67.51
Os06t0643900-01	Rice	extracellular	67.58	67.44
GSMUA_Achr3P13260_001	Banana	extracellular	65.68	66.67
KXG20468	Sorghum	extracellular	66.53	66.39
Zm00001d046593_P001	Maize	extracellular	66.32	66.18
HORVU7Hr1G115510.1	Barley	extracellular	66.32	66.04
GSMUA_Achr1P26030_001	Banana	extracellular	67.16	65.91
TraesCS7A01G517900.1	Wheat	unclear	66.11	65.83
TraesCS7D01G507900.1	Wheat	extracellular	66.11	65.83
TraesCS7B01G434100.1	Wheat	unclear	66.11	65.83
VIT_11s0118g00240.t01	Wine grape	extracellular, plasma membrane	66.74	65.36
TraesCS7B01G434000.1	Wheat	extracellular, plastid	63.58	61.38
KRH51771	Soybean	cytosol	55.58	59.46
KRH39937	Soybean	extracellular, vacuole	57.47	58.84
KRH23858	Soybean	extracellular	57.05	58.41
KRH27195	Soybean	extracellular, plasma membrane, vacuole	56.63	57.36
KRH22146	Soybean	extracellular, golgi	56.21	56.69
KRH51772	Soybean	extracellular, golgi, vacuole	56.42	56.54
KRH30846	Soybean	cytosol	17.47	44.86
KRG96186	Soybean	extracellular, golgi, vacuole	36.63	40.56
KRH67898	Soybean	extracellular, golgi, vacuole	36.63	40.47
KRH73723	Soybean	extracellular	36.0	37.67
KRH46137	Soybean	extracellular, plastid, vacuole	36.84	37.31
KRH32727	Soybean	endoplasmic reticulum	33.05	37.29
KRH14423	Soybean	extracellular, golgi	36.0	37.17
KRH67897	Soybean	plastid	35.58	34.42
KRG96185	Soybean	plastid	35.16	34.08
KRH46686	Soybean	extracellular	33.47	29.07
KRH31582	Soybean	extracellular, mitochondrion, peroxisome, plastid	27.79	28.33
KRG97331	Soybean	extracellular	33.05	27.45
KRG93588	Soybean	extracellular	33.26	26.92
KRH18439	Soybean	extracellular	11.37	25.47
KRH54187	Soybean	nucleus	14.11	22.71
KRH70903	Soybean	endoplasmic reticulum, extracellular, golgi, plastid	25.47	18.88
KRH45750	Soybean	vacuole	24.42	18.83
KRG99244	Soybean	extracellular	24.42	18.83
KRH54186	Soybean	endoplasmic reticulum	24.42	18.62
KRH57229	Soybean	endoplasmic reticulum	24.42	18.59
KRH39860	Soybean	vacuole	24.42	18.12
KRH23936	Soybean	extracellular	23.37	16.84
KRG89498	Soybean	extracellular, plasma membrane	22.11	15.86
KRH63765	Soybean	mitochondrion	15.58	14.26

Protein Annotations

EntrezGene:100818438	Gene3D:2.60.40.380	Gene3D:3.60.21.10	MapMan:35.1	EMBL:ACUP02008247	InterPro:Calcineurin-like_PHP_ApaH
EnsemblPlantsGene:GLYMA_13G161900	GO:GO:0003674	GO:GO:0003824	GO:GO:0003993	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0046872	UniProt:I1LZT0
InterPro:IPR008963	InterPro:IPR029052	EnsemblPlants:KRH20185	ProteinID:KRH20185	ProteinID:KRH20185.1	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF14008	PFAM:PF16656	PANTHER:PTHR22953	PANTHER:PTHR22953:SF55	InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_N	InterPro:Purple_acid_Pase_N	SUPFAM:SSF49363	SUPFAM:SSF56300	SignalP:SignalP-noTM	UniParc:UPI000233B39A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:27748190..27752685

Molecular Weight (calculated)

54466.8 Da

IEP (calculated)

6.768

GRAVY (calculated)

-0.465

Length

475 amino acids

Sequence
(BLAST)

001: MFQYSKAMLL NLVLVSFVLL SSIRDGSAGI TSSFVRPQWP GVDIPVDHEV FAVPKGYNAP QQVHITQGDY DGKAVIVSWV TPDEPGTRHV QYGTSKDKFK
101: TSAEGTVANY TFYNYKSGYI HHCLIEGLEY KTKYYYRIGS GDSARDFWFE TPPKVGPDTP YKFGIIGDLG QTFNSLSTLE HYLESGGEAV LYVGDLSYSD
201: EHDYKDMGLR WDTWGRFAER SAAYQPWMWN VGNHEVEFLP EVGEVEPFKN YLYRYTTPYS ASKSTSPLWY AVRRASAHII VLSSYSPFVK YTPQYIWLKE
301: ELARVDRKKT PWLIVLVHKP LYSSNVAHYM EGEAMRSVFE TWFVQYKVDV IFAGHVHAYE RSYRYSNIDY NITGGRRYPI PDKSAPIYIT IGDGGNLEGL
401: ASSYLDPQPE YSAFREASYG HATLEIKNRT HAIYHWYRND DGKKVPADSL VLHNQYWGSN GRKQNEVIDE VVNVK

Best Arabidopsis Sequence Match ( AT5G34850.1 )
(BLAST)

001: MNHLVIISVF LSSVLLLYRG ESGITSSFIR SEWPAVDIPL DHHVFKVPKG YNAPQQVHIT QGDYDGKAVI ISWVTPDEPG SSQVHYGAVQ GKYEFVAQGT
101: YHNYTFYKYK SGFIHHCLVS DLEHDTKYYY KIESGESSRE FWFVTPPHVH PDASYKFGII GDMGQTFNSL STLEHYMESG AQAVLFLGDL SYADRYQYND
201: VGVRWDSWGR FVERSTAYQP WLWSAGNHEV DYMPYMGEVT PFRNYLQRYT TPYLASKSSS PLWYAVRRAS AHIIVLSSYS PFVKYTPQWH WLSEELTRVD
301: REKTPWLIVL MHVPIYNSNE AHFMEGESMR AAFEEWFVQH KVDVIFAGHV HAYERSYRIS NVRYNVSSGD RYPVPDKSAP VYITVGDGGN QEGLAGRFTE
401: PQPDYSAFRE ASYGHSTLDI KNRTHAIYHW NRNDDGKKVA TDEFVLHNQY WGKNIRRRKL KKHYIRSVVG GWIAT

Arabidopsis Description

PAP26Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UD94]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.