Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 2
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
26583031
nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
26583031
doi
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g009800.1.1 | Tomato | extracellular | 77.36 | 77.36 |
| VIT_11s0118g00240.t01 | Wine grape | extracellular, plasma membrane | 74.63 | 73.4 |
| AT5G34850.1 | Thale cress | extracellular | 72.75 | 73.05 |
| CDY12397 | Canola | extracellular | 71.7 | 72.0 |
| Bra038946.1-P | Field mustard | extracellular | 71.49 | 71.04 |
| CDY47560 | Canola | extracellular | 71.28 | 70.83 |
| Os06t0643900-01 | Rice | extracellular | 70.23 | 70.38 |
| Zm00001d046593_P001 | Maize | extracellular | 69.39 | 69.54 |
| KXG20468 | Sorghum | extracellular | 68.76 | 68.91 |
| KRH03620 | Soybean | endoplasmic reticulum | 73.38 | 68.36 |
| TraesCS7A01G517900.1 | Wheat | unclear | 68.34 | 68.34 |
| KRH20185 | Soybean | nucleus | 67.51 | 67.79 |
| GSMUA_Achr3P13260_001 | Banana | extracellular | 66.04 | 67.31 |
| HORVU7Hr1G115510.1 | Barley | extracellular | 67.3 | 67.3 |
| TraesCS7D01G507900.1 | Wheat | extracellular | 67.09 | 67.09 |
| TraesCS7B01G434100.1 | Wheat | unclear | 66.88 | 66.88 |
| GSMUA_Achr1P26030_001 | Banana | extracellular | 67.09 | 66.12 |
| TraesCS7B01G434000.1 | Wheat | extracellular, plastid | 63.94 | 61.99 |
| Solyc01g110050.1.1 | Tomato | cytosol | 51.99 | 57.41 |
| Solyc01g110060.2.1 | Tomato | nucleus | 54.3 | 55.7 |
| Solyc04g080920.1.1 | Tomato | extracellular | 50.94 | 51.59 |
| Solyc07g053070.1.1 | Tomato | extracellular | 47.8 | 50.0 |
| Solyc09g009610.1.1 | Tomato | extracellular | 36.9 | 41.41 |
| Solyc07g064500.2.1 | Tomato | extracellular | 35.85 | 39.22 |
| Solyc09g009600.1.1 | Tomato | endoplasmic reticulum, vacuole | 34.8 | 37.64 |
| Solyc10g006300.2.1 | Tomato | extracellular, golgi, vacuole | 34.38 | 37.44 |
| Solyc04g051650.2.1 | Tomato | cytosol | 19.08 | 33.58 |
| Solyc09g091910.1.1 | Tomato | extracellular | 31.66 | 27.21 |
| Solyc04g024640.1.1 | Tomato | cytosol | 11.95 | 25.33 |
| Solyc04g051640.2.1 | Tomato | extracellular, golgi | 13.0 | 21.99 |
| Solyc05g012260.2.1 | Tomato | nucleus | 23.48 | 18.48 |
| Solyc08g083250.2.1 | Tomato | extracellular | 22.64 | 17.76 |
| Solyc07g008550.2.1 | Tomato | nucleus | 22.64 | 17.25 |
| Solyc07g008570.2.1 | Tomato | extracellular, plasma membrane | 22.64 | 17.14 |
| Solyc07g008560.2.1 | Tomato | extracellular | 22.85 | 17.14 |
| Solyc04g005450.2.1 | Tomato | nucleus | 22.01 | 16.2 |
| Solyc01g068380.2.1 | Tomato | extracellular | 20.96 | 15.65 |
Protein Annotations
| Gene3D:2.60.40.380 | Gene3D:3.60.21.10 | MapMan:35.1 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003993 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016311 |
| GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR008963 | InterPro:IPR029052 | UniProt:K4CBN7 | InterPro:Metallo-depent_PP-like |
| PFAM:PF00149 | PFAM:PF14008 | PFAM:PF16656 | PANTHER:PTHR22953 | PANTHER:PTHR22953:SF55 | InterPro:Purple_acid_PPase_C_dom |
| InterPro:Purple_acid_Pase-like_N | InterPro:Purple_acid_Pase_N | SUPFAM:SSF49363 | SUPFAM:SSF56300 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g007670.2 |
| EnsemblPlants:Solyc07g007670.2.1 | UniParc:UPI000276AE00 | SEG:seg | : | : | : |
Description
Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:K4CBN7]
Coordinates
chr7:+:2316679..2323829
Molecular Weight (calculated)
54846.0 Da
IEP (calculated)
7.116
GRAVY (calculated)
-0.487
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLCLFFSLS LFSTFIDNGS AGITSAFVRT QFPSVDIPLE NEVLSVPNGY NAPQQVHITQ GDYDGEAVII SWVTADEPGS SEVRYGLSEG KYDVTVEGTL
101: NNYTFYKYES GYIHQCLVTG LQYDTKYYYE IGKGDSARNF WFETPPKVDP DASYKFGIIG DLGQTYNSLS TLQHYMASGA KSVLFVGDLS YADRYQYNDV
201: GVRWDTFGRL VEQSTAYQPW IWSAGNHEIE YFPYMGEVVP FRSFLSRYPT PYRASKSSNP LWYAIRRASA HIIVLSSYSP FVKYTPQWHW LKQEFKKVNR
301: EKTPWLIVLM HVPIYNSNEA HFMEGESMRS SYERWFVKYK VDVIFAGHVH AYERSYRISN IHYNVSGGDA YPVPDKKAPI YITVGDGGNS EGLASKFRDP
401: QPEYSAFREA SYGHSTLDIK NRTHAIYHWN RNDDGNNITT DSFTLHNQYW GSGLRRRKLN KNHLNSVISE RPFTARF
101: NNYTFYKYES GYIHQCLVTG LQYDTKYYYE IGKGDSARNF WFETPPKVDP DASYKFGIIG DLGQTYNSLS TLQHYMASGA KSVLFVGDLS YADRYQYNDV
201: GVRWDTFGRL VEQSTAYQPW IWSAGNHEIE YFPYMGEVVP FRSFLSRYPT PYRASKSSNP LWYAIRRASA HIIVLSSYSP FVKYTPQWHW LKQEFKKVNR
301: EKTPWLIVLM HVPIYNSNEA HFMEGESMRS SYERWFVKYK VDVIFAGHVH AYERSYRISN IHYNVSGGDA YPVPDKKAPI YITVGDGGNS EGLASKFRDP
401: QPEYSAFREA SYGHSTLDIK NRTHAIYHWN RNDDGNNITT DSFTLHNQYW GSGLRRRKLN KNHLNSVISE RPFTARF
001: MNHLVIISVF LSSVLLLYRG ESGITSSFIR SEWPAVDIPL DHHVFKVPKG YNAPQQVHIT QGDYDGKAVI ISWVTPDEPG SSQVHYGAVQ GKYEFVAQGT
101: YHNYTFYKYK SGFIHHCLVS DLEHDTKYYY KIESGESSRE FWFVTPPHVH PDASYKFGII GDMGQTFNSL STLEHYMESG AQAVLFLGDL SYADRYQYND
201: VGVRWDSWGR FVERSTAYQP WLWSAGNHEV DYMPYMGEVT PFRNYLQRYT TPYLASKSSS PLWYAVRRAS AHIIVLSSYS PFVKYTPQWH WLSEELTRVD
301: REKTPWLIVL MHVPIYNSNE AHFMEGESMR AAFEEWFVQH KVDVIFAGHV HAYERSYRIS NVRYNVSSGD RYPVPDKSAP VYITVGDGGN QEGLAGRFTE
401: PQPDYSAFRE ASYGHSTLDI KNRTHAIYHW NRNDDGKKVA TDEFVLHNQY WGKNIRRRKL KKHYIRSVVG GWIAT
101: YHNYTFYKYK SGFIHHCLVS DLEHDTKYYY KIESGESSRE FWFVTPPHVH PDASYKFGII GDMGQTFNSL STLEHYMESG AQAVLFLGDL SYADRYQYND
201: VGVRWDSWGR FVERSTAYQP WLWSAGNHEV DYMPYMGEVT PFRNYLQRYT TPYLASKSSS PLWYAVRRAS AHIIVLSSYS PFVKYTPQWH WLSEELTRVD
301: REKTPWLIVL MHVPIYNSNE AHFMEGESMR AAFEEWFVQH KVDVIFAGHV HAYERSYRIS NVRYNVSSGD RYPVPDKSAP VYITVGDGGN QEGLAGRFTE
401: PQPDYSAFRE ASYGHSTLDI KNRTHAIYHW NRNDDGKKVA TDEFVLHNQY WGKNIRRRKL KKHYIRSVVG GWIAT
Arabidopsis Description
PAP26Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UD94]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.