Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
extracellular: 26583031
msms PMID: 26583031 doi
F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400046260 Potato extracellular, plasma membrane, vacuole 79.97 93.42
KRH39860 Soybean vacuole 65.1 65.0
Zm00001d024395_P001 Maize cytosol 35.84 63.09
KRH23936 Soybean extracellular 64.95 62.97
Os01t0800500-01 Rice extracellular 61.35 62.22
TraesCS3D01G323100.1 Wheat extracellular, plasma membrane, vacuole 60.88 61.94
TraesCS3A01G329700.1 Wheat extracellular 61.03 61.71
TraesCS3B01G359800.1 Wheat extracellular, plasma membrane, vacuole 60.88 61.55
EES01609 Sorghum extracellular, plasma membrane 61.19 60.81
Zm00001d012573_P001 Maize extracellular 61.03 58.65
Zm00001d012574_P004 Maize mitochondrion 61.35 58.07
KXG33559 Sorghum mitochondrion 61.5 56.47
HORVU3Hr1G078360.9 Barley plastid 60.88 54.94
Zm00001d047049_P001 Maize mitochondrion 29.11 51.52
Zm00001d015396_P003 Maize mitochondrion 29.11 51.52
Zm00001d040049_P002 Maize cytosol 26.6 47.89
Solyc08g083250.2.1 Tomato extracellular 32.55 34.21
VIT_13s0019g01250.t01 Wine grape plasma membrane 67.14 33.08
Solyc05g012260.2.1 Tomato nucleus 30.99 32.67
Solyc07g008550.2.1 Tomato nucleus 31.92 32.59
Solyc07g008570.2.1 Tomato extracellular, plasma membrane 31.92 32.38
Solyc04g024640.1.1 Tomato cytosol 11.27 32.0
Solyc07g008560.2.1 Tomato extracellular 31.77 31.92
Solyc04g005450.2.1 Tomato nucleus 30.2 29.78
Solyc07g064500.2.1 Tomato extracellular 18.62 27.29
Solyc10g006300.2.1 Tomato extracellular, golgi, vacuole 18.15 26.48
Solyc09g009610.1.1 Tomato extracellular 16.9 25.41
Solyc09g009600.1.1 Tomato endoplasmic reticulum, vacuole 16.74 24.26
Solyc04g051650.2.1 Tomato cytosol 9.86 23.25
Solyc07g053070.1.1 Tomato extracellular 16.43 23.03
Solyc12g009800.1.1 Tomato extracellular 16.9 22.64
Solyc01g110060.2.1 Tomato nucleus 16.28 22.37
Solyc01g110050.1.1 Tomato cytosol 14.87 21.99
Solyc04g080920.1.1 Tomato extracellular 16.12 21.87
Solyc07g007670.2.1 Tomato extracellular 15.65 20.96
Solyc09g091910.1.1 Tomato extracellular 17.53 20.18
Solyc04g051640.2.1 Tomato extracellular, golgi 7.2 16.31
Protein Annotations
Gene3D:2.60.40.380Gene3D:3.60.21.10MapMan:35.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0003993GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016311
GO:GO:0016787GO:GO:0046872InterPro:IPR008963InterPro:IPR029052UniProt:K4AX84InterPro:Metallo-depent_PP-like
PFAM:PF00149PFAM:PF14008PFAM:PF16656PANTHER:PTHR22953PANTHER:PTHR22953:SF18InterPro:Purple_acid_PPase_C_dom
InterPro:Purple_acid_Pase-like_NInterPro:Purple_acid_Pase_NSUPFAM:SSF49363SUPFAM:SSF56300SignalP:SignalP-TMEnsemblPlantsGene:Solyc01g068380.2
EnsemblPlants:Solyc01g068380.2.1TMHMM:TMhelixUniParc:UPI000276356BSEG:seg::
Description
Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:K4AX84]
Coordinates
chr1:-:77582424..77592344
Molecular Weight (calculated)
71320.8 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.270
Length
639 amino acids
Sequence
(BLAST)
001: MASSFSNYFK FLLSILFFII FFTCHSFSSS NYSLSNIVIN STSEFINHTA ISEFRILNRR ILTQCPDPNP YLSIITASNS TLSDESFVTV HISGVLVPSK
101: GDWVGMISPS YSDSSSCPLN ALQYQQTGDL SELPLLCHYP VKAQYLSKDP GYLNCKKKEC KKHVKGICEV RTCSASLSFH VVNFRTDIEF VLFAGGFATP
201: CILKRSNNNL TFTNPKQPLY GHLSSIDSTA TSMRVTWVSG DETPQQLQYG YGKSQTSQVS TFTQKDMCSS ILKSPAKDFG WHDPGFIHSA VMTGLNPSTT
301: NYYTYGSDSS GWSERITFKT PPAGGTNEVR FLAYGDMGKA PRDPSAEHYI QPGSLSVVKA MVDEVSSGNV DSIFHIGDIS YATGFLVEWD YFLHLITPIA
401: SRISYMTAIG NHERDYIGTG SVYGTPDSGG ECGVPYETYF QMPTQAKDKP WYSIEQGSVH FTVISTEHDW SQNSEQYEWM KNDMASVDRT RTPWLIFMGH
501: RPMYSSVTGG ILQNVDDDFV EAVEPLLLAN KVDLALFGHV HNYERTCAVY QKECKAMPTK DASGIDTYDN SNYSAPVHAV IGMAGFNLDQ FPSQADEWSL
601: VRKVEFGYVR VHATRNSLTT EYVNANTRKL EDNFKIIKS
Best Arabidopsis Sequence Match ( AT2G03450.1 )
(BLAST)
001: MIAAVYTLFF FFLLISSVYS KATISISPQT LNRSGDIVVI KWSGVESPSD LDWLGIYSPP DSPHDHFIGY KFLSDSPTWQ SGSGSISLPL TNLRSNYTFR
101: IFHWTQSEIN PKHQDHDHNP LPGTRHLLTE SNQLNFRFAV NRPEQIHLSY TDNINEMRVV FVTGDGEERE ARYGEVKDKL DNIAVARGVR YEIEHMCHAP
201: ANSTVGWRDP GWTFDAVMKN LKQGIRYYYQ VGSDLKGWSE IHSFVSRNEG SEETLAFMFG DMGCYTPYTT FIRGEEESLS TVKWILRDIE ALGDDKPVIV
301: SHIGDISYAR GYSWIWDEFF TQIEPIASKV PYHVCIGNHE YDWPNQPWKP DWAAYVYGKD SGGECGVPYS VKFNMPGNST EATGMVKGPQ SRNLYYSYDM
401: GSVHFVYIST ETDFLKGGKQ YSFLKSDLES VNRSKTPFVV VQGHRPMYTT SRKIRDAAIR EKMIEHLEPL LVKNNVTVAL WGHVHRYERF CAISNNTCGE
501: RWQGNPVHLV IGMAGKDSQP MWEPRANHED VPIFPQPANS MYRGGEFGYI RLVANKERLT LSYVGNHDGE VHDVVEILAS GEVISGSDDG TKDSNFGSES
601: DFAVLWYIEG ASVMVVGVIF GYFVGFLSRK KKESGVGSSN RSWIQVKNEE T
Arabidopsis Description
PAP9Probable inactive purple acid phosphatase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ81]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.